Gene Shew185_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2126 
Symbol 
ID5371261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp2535907 
End bp2536545 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content47% 
IMG OID640830338 
ProductTetR family transcriptional regulator 
Protein accessionYP_001366331 
Protein GI153000650 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00345057 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTC GATCCGATAC AAAAACTAGA ATACTTGATG CCGCAGAAAA ACTGTTCGCC 
GAACGGGGCT TTTCTGAGAC CTCGTTGCGA CTCATCACCA GTAAGGCTGA GGTGAATTTA 
GCATCGGTCA ATTATCACTT TGGTTCTAAA AAAGAGCTGA TCCGTGCAGT ATTAGCGCGT 
TATTTAGACG TGTTTATGCC TGCGGCTTCA AACCAAATTA ATCGCTTAAA TGCCGCGCCA 
GCACAAGCAA CACTCGAAGA AATTTTGTCT TCGCTGGTCG ATCCTTTATT GGATTTAAAC 
GCGCTACGTA CCGAAGGCAC TACGATCTTC CTGCAGCTTT TAGGCCGCGG TTATATCGAA 
AGCCAAGGGC ATTTACGTTG GTTTATCACT ACCCATTACG GCCAGCATCT CGATGCTTTT 
GTTAAAGCCG TGTCGGCCAG TGCGCCACAT ATTCCACCCG CTGAAATGTT TTGGCGTTTA 
CACTTTACCT TAGGCACTAT CGTATTCACT ATGGCGTCCG CCGATGCCCT AAACGATATC 
GCTGCTACTG AGTTTGGTGA GCATAACGAC ATCGAAGCCG TGATCCGTAA AGTGATCCCA 
TACATGGCGG CTGGCGTATC AGTCCCCGTT TCTTCTTAA
 
Protein sequence
MASRSDTKTR ILDAAEKLFA ERGFSETSLR LITSKAEVNL ASVNYHFGSK KELIRAVLAR 
YLDVFMPAAS NQINRLNAAP AQATLEEILS SLVDPLLDLN ALRTEGTTIF LQLLGRGYIE 
SQGHLRWFIT THYGQHLDAF VKAVSASAPH IPPAEMFWRL HFTLGTIVFT MASADALNDI 
AATEFGEHND IEAVIRKVIP YMAAGVSVPV SS