Gene Shew185_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2060 
Symbol 
ID5373217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2470911 
End bp2471609 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content49% 
IMG OID640830264 
Productelectron transport complex RsxE subunit 
Protein accessionYP_001366265 
Protein GI153000584 
COG category[C] Energy production and conversion 
COG ID[COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE 
TIGRFAM ID[TIGR01948] electron transport complex, RnfABCDGE type, E subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.14893e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTAATT ATCGCGAAAT TGCTTGGCAA GGTCTGTGGA AGAATAATCC TGGCCTAGTG 
CAACTATTAG GCTTGTGCCC GCTGCTTGCG GTCACAGCGA CGATCACGAA TGCGCTAGGG
CTTGGCCTAG CGACTATGTT GGTGCTGATT GGCTCTAATA TTTTAGTGTC ACTGGTGCGC
GACTATGTGC CCAAAGAAAT TCGTATTCCA GTATTTGTGA TGATCATCGC CGCGTTAGTG
ACCACAGTGC AATTGCTCAT CAATGCCTAT GCCTACGGTC TGTATTTATC CCTTGGGATC
TTCCTACCGT TGATTGTGAC CAACTGCATC ATTATCGGTC GCGCCGAAGC CTTTGCCTCG
CGTAATAACG CCTTTAGCGC TGCCTTCGAT GGTCTGATGA TGGGACTCGG TTTTACCTTA
GTGCTGACCG TATTAGGCGC AACGCGGGAA ATCTTAGGTC AAGGCACACT GTTTGATGGC
GCCGATCAAC TGCTCGGCCC GTGGGCTAAA TCCTTAACCA TTCATTTATG GCAAGTCGAT
ACTCCTTTTC TGCTCGCTAT GCTGCCACCT GGCGCATTTA TCGTCATGGG ACTATTGATT
GCATTGAAGA ATGTGATTGA TAAAAAAGTG AAAGAACGCC AACCTCAAGT CGCCGCAGAG
CCAAGTGTCA CCCGTGCGCG CATCACTAAG GTTGGTTAG
 
Protein sequence
MTNYREIAWQ GLWKNNPGLV QLLGLCPLLA VTATITNALG LGLATMLVLI GSNILVSLVR 
DYVPKEIRIP VFVMIIAALV TTVQLLINAY AYGLYLSLGI FLPLIVTNCI IIGRAEAFAS
RNNAFSAAFD GLMMGLGFTL VLTVLGATRE ILGQGTLFDG ADQLLGPWAK SLTIHLWQVD
TPFLLAMLPP GAFIVMGLLI ALKNVIDKKV KERQPQVAAE PSVTRARITK VG