Gene Shew185_2059 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2059 
Symbol 
ID5373216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand- 
Start bp2470032 
End bp2470673 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content48% 
IMG OID640830263 
Productendonuclease III 
Protein accessionYP_001366264 
Protein GI153000583 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00000403968 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCAAG AAAAACGCAT CCAGATCCTT ACCCGTCTTC GCGATAACAA TCCGAAACCT 
GAAACCGAAC TCAATTTCTC CAGTCCTTTT GAACTCTTAG TCGCGGTGAC CTTATCCGCC 
CAAGCGACGG ATGTGAGCGT CAACAAGGCA ACGGACAAAC TCTTTCCTGT GGCGAACACG 
GCCCATAGCA TTTATGCCCT TGGCGTCGAT GGTTTAAAAC AATACATAAA AACCATAGGC 
TTATATAACA ACAAAGCCGT CAATGTGATC AAAGCCTGTG AGATCTTAAT TGAGAAATAC 
AATGGCGAAG TGCCAGAAAA CCGCGAAGCC CTAGAGTCTC TGCCAGGCGT TGGCCGTAAA 
ACGGCAAACG TGGTGCTCAA TACTGCGTTT GGTTGGCCAA CCATCGCCGT CGACACCCAT 
ATTTTCCGCC TCGCCAATCG CACTAAATTT GCGCCCGGCA AGAACGTGGT CGAAGTGGAA 
GATAAAATGC TCAAAGTCGT GCCTGCGGAA TTTAAAGTCG ATGTGCACCA CTGGTTTATC 
CTGCACGGAC GCTACACTTG CCTTGCGCGC AAACCTCGCT GCGGCAGCTG TATCATTGAA 
GACTTGTGCG AATTTAAAGA AAAAATTTAT CCTGAAGAGT AA
 
Protein sequence
MNQEKRIQIL TRLRDNNPKP ETELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT 
AHSIYALGVD GLKQYIKTIG LYNNKAVNVI KACEILIEKY NGEVPENREA LESLPGVGRK 
TANVVLNTAF GWPTIAVDTH IFRLANRTKF APGKNVVEVE DKMLKVVPAE FKVDVHHWFI 
LHGRYTCLAR KPRCGSCIIE DLCEFKEKIY PEE