Gene Shew185_2056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2056 
Symbol 
ID5371875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2468063 
End bp2468731 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID640830260 
Productputative sulfite oxidase subunit YedZ 
Protein accessionYP_001366261 
Protein GI153000580 
COG category[S] Function unknown 
COG ID[COG2717] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.05808e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAGAT TAACCGCTAA GCACTTGTTT TGGTTAAAAG CGTTATTTCA TTTGCTGGGT 
TTAGTGCCCA TCGTCTACCT GGTGCTCACT GTAGTGTTAG GCCGCGCGGG CGGCGATCCC
GTGCAGCACA TTATCCACTA CACAGGTATA GGCGCGTTAA ATGCCTTAGC GGCGACCTTA
TTGATCTCAC CGATTGCCAA GCTGACCAAG CAAGGGCTAT TAATGCAGAC TCGTCGCTTG
GTGGGGTTAT ATGTGTTCGC CTATGCCACT TTGCATATTC TGGCATTCTT TAGTTTAGAT
CTGTTGTTTG CTTGGGAATT ACTGTTTAGC GAAGTGGTAA AACGGCCGTA CATTTTAGTC
GGCGCTGTGG CTTATCTTAT CGTCACTGCT TTGGCGATAA CTTCGTTTAA AGGCTTGATG
CGTAAGATGG GACGTCGTTG GCAGACCTTG CATAATGGGG TGTATTTAGT CGCGATATTA
GCGCCAATCC ATTTTTACTG GTCGGTAAAA TCGGAAATCA TTGAGCCGAG TCTTTATATC
TTAGGTTTTA GCGTGTTATT GCTATGGCGC ACGCCTTGGC TTAAGCGCAT CCTCAGCGGC
AAAGGGATGA ATAAAACCGT GAAAAAGACG ACCAGTGGAC AAGATAAAAC GTCGATTAAA
TCAGCTTAA
 
Protein sequence
MLRLTAKHLF WLKALFHLLG LVPIVYLVLT VVLGRAGGDP VQHIIHYTGI GALNALAATL 
LISPIAKLTK QGLLMQTRRL VGLYVFAYAT LHILAFFSLD LLFAWELLFS EVVKRPYILV
GAVAYLIVTA LAITSFKGLM RKMGRRWQTL HNGVYLVAIL APIHFYWSVK SEIIEPSLYI
LGFSVLLLWR TPWLKRILSG KGMNKTVKKT TSGQDKTSIK SA