Gene Shew185_2019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2019 
SymbolfadE 
ID5373696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2408581 
End bp2411028 
Gene Length2448 bp 
Protein Length815 aa 
Translation table11 
GC content50% 
IMG OID640830224 
Productacyl-CoA dehydrogenase 
Protein accessionYP_001366225 
Protein GI153000544 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.9403e-07 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACTACCC TACTTTGGAT CATCGCCATG ATCTTAGTGC TAGGAGCCCT AGCTTACCTT 
CGGGTATCTT TGCTCACTGC CACTATTGCA GCCGCTGTTG TGATGACAGC AGGATGGACA
CTCGATGTTG TCGGCCCTAT CTCTTGGATC GTTTTCCTCG TGATCGCGCT GCCGTTAAAT
ATCAGTGCAT TTAGACAAAA TGTGATCAGT CGTCCACTGA TGAAGGTATA TCGCGGCATC
ATGCCGGAAA TGTCTTCAAC AGAGAAAGAA GCGATTGAAG CCGGCACCAC TTGGTGGGAA
GCCGATCTGT TTGCGGGTAA CCCGAACTGG AAAAAACTCC ATAACTACCC AGTTGCGCGT
TTAAGTGCAG ACGAACAAGC CTTCCTCGAT GGCCCTGTTG AAGAAGTGTG CCGCATGGTG
AATCAACACC AAGTGTCACA TCAACTTGCC GATCTGCCTG CCGACGTATG GCAATATCTG
AAAGATCACG GTTTCTTCGC CATGATCATT AAGAAAAAAT ACGGCGGTTT AGAATATTCA
GCTTATGCCC AATCGCGCGT GTTACAAAAA CTGGCGGGCT TAAGTAGTGA ATTGGCTTCA
ACTGTTGGCG TACCTAACTC TTTAGGCCCT GGAGAGCTGC TGCAACATTA CGGCACGCCA
GAACAACAAA ACCATTATTT ACCGCGTTTA GCCAAAGGGT TAGAAGTCCC TTGTTTCGCT
CTGACCAGCC CAGAAGCCGG TAGCGATGCA GGCTCGATTC CTGACTTTGG TATTGTGTGT
AAAGGCCAAT GGGAAGGCGA AGAAGTTCTG GGTATGAAAC TGACCTGGAA CAAGCGTTAC
ATCACTTTAG CCCCTGTTGC GACAGTATTA GGCTTAGCCT TTAAACTGCG CGATCCAGAG
CATCTCCTTG GCGATAAAGA AGAACTCGGC ATTACTTGTG CTTTGATCCC TACCGATGTG
GAAGGAGTAG AAACCGGTCG TCGTCACTTC CCGCTCAACT GCATGTTCCA AAACGGTCCG
ACTCGCGGCA ACGAAGTATT CGTACCATTA AGCTTCATCA TTGGCGGCCC GAAAATGGCA
GGTCAAGGCT GGCGCATGCT GGTGGAGTGT TTATCAGTGG GTCGTGGTAT CACACTGCCA
TCAAACTCAG CTGGCGGCGT GAAAACCGCA GCGCTGGCAA CGGGTGCTTA TGCTCGCATT
CGTCGTCAAT TCAAATTGCC TATCGGCAAG CTTGAAGGTA TCGAAGAGCC AATGGCACGC
ATCGGCGGTA ACGCTTATCT GATGGATGCG GTAACCACGT TAACCACTAC AGGTATCGAC
CTAGGTGAAA AACCGTCGGT TATCTCTGCG ATTGTGAAAT ATCACCTGAC AGACAGAATG
CAGAAATGCG TTATCGATGC CATGGATATT CACGGCGGTA AAGGCGTGTG TCTTGGCCCC
AATAACTACT TAGGTCGTGG CTACCAAGCT GCGCCTATCG CGATTACCGT TGAAGGCGCA
AACATCCTGA CCCGTTCTAT GATCATCTAC GGCCAAGGCG CAATTCGCTG CCATCCGTAC
GTGCTTGCAG AAATGGAATC AGCGTTTGAT ACCGAATCGG GTCAAGGTTT AGCTAACTTT
GATGCGGCCA TCTTTGGTCA CATTGGTTTT GCGACCAGTA ACTTCATCCG TAGCTTCTGG
TTAGGTCTGA CATCAAGCCG TTTCTCTAAC GCGCCTTATT CAGATAAAAC CAAGCGTTAT
TATCAACAGA TGAACCGTTT CAGTGCCAAC CTTGCCCTGC TCTCTGACTT AGCCATGGCA
ACCTTGGGCG GCAACCTGAA ACGTAAAGAG CGTATCTCTG CCCGTTTAGG TGACTTACTG
AGCCAACTGT ATCTGGCATC TGCCACGCTG AAGCGCTATG AAGATGAAGG CCGTCAAACC
GACGACTTAC CATTAGTGCA ATGGGCGGTT GAAGATGCGC TGTACAAGTT ACAAGCTTCT
TTAGACGATT TGCTGGATAA CTTCCCTATG GGTCTTGGCG GCGCATTACG CGTGGTGATG
TTCCCATTCG GTCGTCCACT GAAACGCCCA AGCGATGTGT TAGATCATAA AGTCGCTAAG
ATCATGCAAA CACCGTGTGA AAGCCGTGAC CGTTTAGGTA AAGGCCAGTT CTGGACCAAC
TCTGAGCACA ATGCTGTGGG TATCCAAGAA CAAACGCTGC TCGACATCAT CGCGTCTGAG
CCTCTGCATG ACAAAGTCTG TAAGGCGAGC GGTAAACGTC TACCCTTCAT GTGGTTAGAT
AAAGTAGCCG CTGAAGGTAA AGCACTGGGC GTGCTGAGCG ACGATGAAGT TAACTTGCTA
GAAAGAGCGG AAATCGGTCG TATGAAGTCA ATCAACGTTG ATGACTTTGA CCCAGCTGAA
CTGCGTCCAG AAGTGGTTTC AACCTCTTCA CAGGAACGCG CAGCGTAA
 
Protein sequence
MTTLLWIIAM ILVLGALAYL RVSLLTATIA AAVVMTAGWT LDVVGPISWI VFLVIALPLN 
ISAFRQNVIS RPLMKVYRGI MPEMSSTEKE AIEAGTTWWE ADLFAGNPNW KKLHNYPVAR
LSADEQAFLD GPVEEVCRMV NQHQVSHQLA DLPADVWQYL KDHGFFAMII KKKYGGLEYS
AYAQSRVLQK LAGLSSELAS TVGVPNSLGP GELLQHYGTP EQQNHYLPRL AKGLEVPCFA
LTSPEAGSDA GSIPDFGIVC KGQWEGEEVL GMKLTWNKRY ITLAPVATVL GLAFKLRDPE
HLLGDKEELG ITCALIPTDV EGVETGRRHF PLNCMFQNGP TRGNEVFVPL SFIIGGPKMA
GQGWRMLVEC LSVGRGITLP SNSAGGVKTA ALATGAYARI RRQFKLPIGK LEGIEEPMAR
IGGNAYLMDA VTTLTTTGID LGEKPSVISA IVKYHLTDRM QKCVIDAMDI HGGKGVCLGP
NNYLGRGYQA APIAITVEGA NILTRSMIIY GQGAIRCHPY VLAEMESAFD TESGQGLANF
DAAIFGHIGF ATSNFIRSFW LGLTSSRFSN APYSDKTKRY YQQMNRFSAN LALLSDLAMA
TLGGNLKRKE RISARLGDLL SQLYLASATL KRYEDEGRQT DDLPLVQWAV EDALYKLQAS
LDDLLDNFPM GLGGALRVVM FPFGRPLKRP SDVLDHKVAK IMQTPCESRD RLGKGQFWTN
SEHNAVGIQE QTLLDIIASE PLHDKVCKAS GKRLPFMWLD KVAAEGKALG VLSDDEVNLL
ERAEIGRMKS INVDDFDPAE LRPEVVSTSS QERAA