Gene Shew185_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2017 
Symbol 
ID5373221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2404833 
End bp2406815 
Gene Length1983 bp 
Protein Length660 aa 
Translation table11 
GC content47% 
IMG OID640830222 
Productsodium/hydrogen exchanger 
Protein accessionYP_001366223 
Protein GI153000542 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0025] NhaP-type Na+/H+ and K+/H+ antiporters 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.55921e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGAAC AAATCACGGG TATGTTAGCG CTGATTGGGG TGTTATCGCT TTTTTGTCAA 
TGGCTTGGTT GGAAACTGCG GTTACCGGCG ATTTTGCCCT TACTGCTCTG TGGACTCACC
CTCGGCCCCG GACTTGGCTT CCTTAATCCC GATGCTATTT TTGGCAATTT ACTCTTTCCG
ATCATTTCTC TCGGGGTTGC CGTGATTTTG TTTGAAGGCG CATTGACTCT CAACTTTAAA
GAAATCAAAG ATCATGGTCG TATGGTGACG CATCTTGTGA CCATAGGGAC AGTGATCACT
TGGGCTTGTA TCAGCACGGC CACCTTTTAT TTACTCGATT TTAGTTGGGA AATTGCACTC
CTCTTTGGCG CATTAGTGGT GGTGACGGGG CCGACGGTTA TCGTGCCTAT GCTCAGAAGT
GTGCGCCCCA AATCCCAATT GGCGAGTATT TTACGCTGGG AAGGCATTGT CATCGACCCC
ATAGGCGCGC TGCTCGCAGT ATTAGTTTTT GAATATATTA CAGTTTCAGG CGATCAGACA
ACGCATGTGC TTTATGCCCT AGGTTCAATG CTTTCTCTAG GATTAGGACT TGGAGCGGCA
GCAGGTTACC TCACTGGGCA AATATTAAGA CGCAACCTGT TGCCACATTA TTTGCGCAAT
ACCGCAGTCT TAACCTTAAT GCTCGGCATC TTTGTCGGTT CGAACCTATT ACAGGAAGAG
TCGGGTCTAC TGACTGTGAC CGTTATGGGC ATTTGGCTTG CCAATATGCG CGGTGTGGAT
ATTGCTGAAA TCCTTGAGTT TAAAGAGACC TTAACCGTAC TACTGATTTC GGCACTGTTT
ATTTTATTGG CGGCGCGATT AGATTCTAAT GCCATGCTCG ATTTAGGTTG GGGTGGACTA
GGCGTTTTAG CAGTCACTAT GTTGTTAGCA CGGCCGCTGA GTATTTGGGT TTCTGGTATC
GGCACCTCTT TGTCGAGGGC TGATAAGTGG TTTTTATGCT GGATTGCGCC CCGAGGCATA
GTCGCTGCGG CGGTATCGTC ATTGTTTGCG ATTAAGTTAG AAGCCAACAA TGTGCAAGGC
GCCGATGCGA TTGTGCCCTT AGTGTTTTTA ATTATTATCG GCACGGTCGT TATCCAAAGT
TTAACCGCGG GACGTTGGGC GCGATTCCTC GGTGTCAAAG CCGATTCTGC CCAAGGTTTA
TTGATTTTCG GTGCTTCTAA ATTTTCCCGT GAGTTAGCGA AAATCTTAAA AGCCAAGGAT
GTCAAAGTGC TATTGGCTGA TAATAACTGG GATAATATTC GCCTAGCACG TATGGATAAT
ATCCCGGTGT ATTTTGGCAA TCCCGCATCT GAACATGCTG AAACCTATAT GGATTTAACT
GGGATTGGCC GCGTGTTGAT CATTTCGCCT TATCGACAAT TAAACCCTCT AGTGAGTTTC
CATTTTCAAG ATTTCTTTGG CACTAAGAAG GTCTTTGGCT TAAATAATAC CGAAGTGGGC
AGTGCGCGCC ACCAGCTCTC TGAAACTTAT AAGCAGCGCT TATGTCTGTT TGGTGATGCC
GTGTCCTATG CCAAGATTGC AAGCCTGATG GCGAGGGGCG CTCAACTTAA AGTGACCAAT
TTAACCGAAA ACTTCAGCTT TGAGCATTTC CGTAAGCGTT ACGGTGAAAC GGCTATGCCA
TTGGTTTATT TAACCAAGGA AGGTAAGGTC GTCGTAGTAT CAGGTAATGA TACTGTGTTC
CCGAATGGTA TTGAGCTGAT TAGCCTGTTG CCGATTGAAG CCTTAGAAGA AGCCAAAGTA
CAGCAAGCGA TTGCAGAGCG AGAAGCACTG GAAGCCCAAG AGAAATCCGC CGCAGAAGCC
GCTTTAGCGA AGGCAAAAGC GGAAGAGGAG GCTGAGCAAT TAAGGCTCGA GAAATCAGAC
GCTAACACTG TAATAAATGA CGAAGCTGAC AAGGGTGTGG TGGATAACAT GATAAAGAGT
TAA
 
Protein sequence
MVEQITGMLA LIGVLSLFCQ WLGWKLRLPA ILPLLLCGLT LGPGLGFLNP DAIFGNLLFP 
IISLGVAVIL FEGALTLNFK EIKDHGRMVT HLVTIGTVIT WACISTATFY LLDFSWEIAL
LFGALVVVTG PTVIVPMLRS VRPKSQLASI LRWEGIVIDP IGALLAVLVF EYITVSGDQT
THVLYALGSM LSLGLGLGAA AGYLTGQILR RNLLPHYLRN TAVLTLMLGI FVGSNLLQEE
SGLLTVTVMG IWLANMRGVD IAEILEFKET LTVLLISALF ILLAARLDSN AMLDLGWGGL
GVLAVTMLLA RPLSIWVSGI GTSLSRADKW FLCWIAPRGI VAAAVSSLFA IKLEANNVQG
ADAIVPLVFL IIIGTVVIQS LTAGRWARFL GVKADSAQGL LIFGASKFSR ELAKILKAKD
VKVLLADNNW DNIRLARMDN IPVYFGNPAS EHAETYMDLT GIGRVLIISP YRQLNPLVSF
HFQDFFGTKK VFGLNNTEVG SARHQLSETY KQRLCLFGDA VSYAKIASLM ARGAQLKVTN
LTENFSFEHF RKRYGETAMP LVYLTKEGKV VVVSGNDTVF PNGIELISLL PIEALEEAKV
QQAIAEREAL EAQEKSAAEA ALAKAKAEEE AEQLRLEKSD ANTVINDEAD KGVVDNMIKS