Gene Shew185_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2013 
Symbol 
ID5373374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2400416 
End bp2401354 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content50% 
IMG OID640830217 
ProductLysR family transcriptional regulator 
Protein accessionYP_001366219 
Protein GI153000538 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.07825e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGATCA CCTTAAGACA ACTGGCGGTA TTTGAGGCTG TGGCACGTAG CGGCCAAGTC 
GCAAAGGCGG CGGAGCAAGT TAATTTATCA CCACCTGCCA CTTCTATGGC CTTGGCTGAG
TTAGAAAAAC AGCTTAATGC CCGCCTATTC GAGCGCATTG GCAATCGATT ACAGCTGAAC
TCGCAGGGCA ATTTACTGTT GCCACTGGCG ACGGATTTAT TGCACCGTGT CGAGCAAATT
GAGCAGGCAT TTACCTACCA TGGTGGCGAT TTGGTTGGGC GGTTAAGTAT CAGTGCCAGT
TCGACCATAG GTAACTATTT GATGGCGAAA GCCGCAGTGG CATTTTGTCA GCAGCACACT
CAAACCCATG TGGATGTGGC GATCACAAAT ACTCAAGATG TGATCCAAGC GGTTGCGCAG
TTCCGATCTG AAATGGGCTT TATCGAAGGT CATTGCACCG ATAATCGTTT GAGTGTTGAA
GCTTGGCATA AGGATAGGCT GCTGGTGTTT TGTCATCCGG CGCATCCTCT GGCGGGAAAA
GTGGTTAAAC CGGCGCAAGT GAGAGGCCAG TCATGGGTGT TACGTGAAGA AGGCTCGGGC
ACTCGTGAGT ATTTTGTCAA TGCTGCCAAT GAGTTGGATA TGCAGCCAGA AGCTAAGTTC
TGCTTTACTA CGCCGGATGC GATTAAACTG GCGGTGAAAC AAGGTGCTGG GCTTGGGGTG
TTATCTGAGC TGGCGCTGGA GAAAGAAATC AGCCGCAAAG AGTTAGCGTT AGTCACGATT
GAGGGATTAG TGCTGGAGCG GCAGTTTTAT CGCATCACCC ATAAGAGCCG TCAGGCGACA
TCCCTTGGCC AAGCTTTTGT GCAGTTCTGT GAGAATTTTT TCAATATCGC AGGGGTGGAA
CCAAATAAGC CGTTTGATAG CAATGGCCAT ATGCAGTGA
 
Protein sequence
MRITLRQLAV FEAVARSGQV AKAAEQVNLS PPATSMALAE LEKQLNARLF ERIGNRLQLN 
SQGNLLLPLA TDLLHRVEQI EQAFTYHGGD LVGRLSISAS STIGNYLMAK AAVAFCQQHT
QTHVDVAITN TQDVIQAVAQ FRSEMGFIEG HCTDNRLSVE AWHKDRLLVF CHPAHPLAGK
VVKPAQVRGQ SWVLREEGSG TREYFVNAAN ELDMQPEAKF CFTTPDAIKL AVKQGAGLGV
LSELALEKEI SRKELALVTI EGLVLERQFY RITHKSRQAT SLGQAFVQFC ENFFNIAGVE
PNKPFDSNGH MQ