Gene Shew185_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_2011 
Symbol 
ID5373372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2398699 
End bp2399490 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content49% 
IMG OID640830215 
Producthydroxyacylglutathione hydrolase 
Protein accessionYP_001366217 
Protein GI153000536 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID[TIGR03413] hydroxyacylglutathione hydrolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.46784e-09 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCACTA TAACAGCGAT CAAAGCCTTT AATGACAATT ATATCTGGGT GTTACAACAA 
CAACCGCATA CACAGGTTTA TGTCGTCGAT CCCGGCGATG CGAGTGTGGT GATTGACTAT
CTAGAAGCCA ATAAACTCAC GCTAGCGGGC ATTTTACTGA CCCACCACCA CAATGACCAT
ACGGGTGGCG TCGCTGAACT TCAAGCCTAC AGTCAAAACA GGCTCTCAGT GTATGGCCCA
GATAATGAGA AGATTGAAGG CATCACCCAT CCGTTGCACG CAACAGCACA GCCCAGATTT
ATACTCGACT ATATGAGTGG CGAGCTGCAA GTCTTAGATG TACCGGGGCA CACAGCAGGA
CATATTGCCT ACGTTATTGC AGATGCCTTA TTCTGCGGTG ATACCTTATT TAGCGGTGGC
TGCGGACGCT TATTTGAAGG TACGCCAGCG CAAATGCTCA ACTCACTACA GCAACTTGCC
CAGCTTCCCG CCGACACTCG GGTGTATTGT GCTCATGAGT ACACACTTTC AAACCTCAAA
TTTGCCCTCG CGGTCAATCC CAACAATCGC GCGCTGCAAG ACTATAACGA ACGCGCCATA
GCGTTGCGTC GCCAAGAGAA AGCGACTATC CCCTCCACCA TCGCTTTAGA GCGCGCCATC
AATCCCTTTC TACGTGCCAG CGACACTGAG ATTGTTGACA GCATAAAACA GCATTTTAGC
GATCTAAATC ATGCCAATTT AGACGAACTT GGCGGTTTTA CCCTGCTCAG ACAGTGGAAA
GATAATTTTT GA
 
Protein sequence
MLTITAIKAF NDNYIWVLQQ QPHTQVYVVD PGDASVVIDY LEANKLTLAG ILLTHHHNDH 
TGGVAELQAY SQNRLSVYGP DNEKIEGITH PLHATAQPRF ILDYMSGELQ VLDVPGHTAG
HIAYVIADAL FCGDTLFSGG CGRLFEGTPA QMLNSLQQLA QLPADTRVYC AHEYTLSNLK
FALAVNPNNR ALQDYNERAI ALRRQEKATI PSTIALERAI NPFLRASDTE IVDSIKQHFS
DLNHANLDEL GGFTLLRQWK DNF