| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_2008 |
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| Symbol | |
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| ID | 5370144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2394336 |
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| End bp | 2396159 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640830212 |
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| Product | AsmA family protein |
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| Protein accession | YP_001366214 |
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| Protein GI | 153000533 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0960641 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTCA TTAAGTGGCT CCTGGCCTTA GTGGTGACGC TCATTCTTTT AGTCACAGTG
TATCTCACCG TATTTTTCGA CCCTAATGAT TTTAAACCTG AAATAGTTGA TGCCGTAAAA
AAACAAACGG GTCGTGAATT AGTCATCGCT GACGATTTAT CCTGGACCTT TTTCCCTGTT
ATCGGCATTA ATTTAGGGGG CGTGTCTTTA TCTAATCCTG AAGGCTTTAC CCCTAAGGCT
ATGTTAGAAG TCAACAAAGC CGTTGCCGAA GTGGCGTTGA TGCCATTGTT TAGTCAGCAA
ATTGAAATTG CGGAACTGAG TCTCGATGGT GCAACCATTA ATTTAGTGAC TCGCAAGAAT
GGCACCAACA GTTTTGATGG ATTAAGTGGT GATAATAGTA AGAAAGCCGC AACTCCAGCG
GCCGAAACTT CCTCAAATGC CAAACTGAAC GATATTAATA TTGGCGGTAT TTCAATCACC
AATACCCAAA TTAATATGAT TGACGAAGCG AAAAAGCAAA CTCAAGTCTT TACCTTAAAA
AGCTTCACCT TAGGTGAATT CGCTTTAGAA CAATTTGCGC CCATCGCCTT TGAATTCAGT
GCAACTATGC CGGACATGAC GGTAAGCAGT GAAGGCAAAG GTGAACTAAA ATTAAGCCGA
GACTTGACGC AACTCGTCGT CAATGGACTC AAAATTGACA CAGTGGTGGA AGGTGAGAGT
ATTCCTAATA AGAAACTCGA AACATCGATT AGCTTAGCGA CTCAAATTGC GTTGGATAAA
CAGCAATTAT CCGTCGATAT TGCGCAGCTT AACGCGGCGA GTATTACCGC TGCCGGTAAA
GTTGGCGTGA ATTACGCCAC AAAAATTCCG CAAATCAATG CTGATTTTCA AGTCGGCGAT
ATCGATTTAG ATACGCTGTT ACCTAAAACG GAAACCGCTG CCGCAACAGA ACAAGCACTC
GCTGTAAGTA CTCAGGCAGT TGAGCCTGAT CTCTCTGCCC TTAAGCAGCT TGATTTAAAA
CTCAAGTTGA CCGTTAAGTC TATTAAGGTT GCTAACCTGT CGACTCAAAA TTGGTTGATG
GATGTGGGAA TTAAAAATGG CGTGTTAGAT CTAACGAAAC TTAATGCGGA TTTATACCAA
GGTAAGTTGC TGGTGAGCGC TCAGGTCGAT GCACGTCAAG CGGTGGCAAG TTATCAATTC
GATAAAAAAG TGACGGGTGT ACAAATTCGT CCTTTGCTGA AAGATGCGGC GGATGTGGAT
TTACTGGCGG GTACAGCCAA CTTTGATGTG AAAGGTAAAG GTAGGAGTTT GATCCCTGAG
CAGTTAAAGA AAAATCTATT AGCCAATGGC CATTTTGATA TTAATGACGG GGCTTTGTAC
GGGGTTAACA TACCGCAGAT GATCCGTAGC GCCCAAGCTA AGTTAAAGGG TGACTTATCG
CCAGAAACCA AGGAAGAGCG CAAAACCGAC TTCTCGAGTC TGACTGGTAG TTTCTCGCTG
GATAATGGCG TTGCTACTAA CCCAGATCTT GCTATGTCTT CACCTTTATT GCGTTTGGCG
GGCAAAGGTA CGGCGAATTT ATTGACTGAA GCCTTAGACT ACAGATTGAC GACTAGCCTA
GTGAATTCAT TAAAAGGTCA GGGCGGTAGC GACAAAGATG CGCTGGCAGG AATTGACATT
CCGTTGGCTA TTACCGGGAC TTTCCAAAAA CCTGAATATG CCTTGGATAC TAAGGCGTTA
CTGAATAATC AGTTAAAAGA AGAAACCGAC AAAGCTAAGG AAAAATTAAA AGACTCCTTA
CTGAAAAAAC TAGGAGGTTT CTAA
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| Protein sequence | MKFIKWLLAL VVTLILLVTV YLTVFFDPND FKPEIVDAVK KQTGRELVIA DDLSWTFFPV
IGINLGGVSL SNPEGFTPKA MLEVNKAVAE VALMPLFSQQ IEIAELSLDG ATINLVTRKN
GTNSFDGLSG DNSKKAATPA AETSSNAKLN DINIGGISIT NTQINMIDEA KKQTQVFTLK
SFTLGEFALE QFAPIAFEFS ATMPDMTVSS EGKGELKLSR DLTQLVVNGL KIDTVVEGES
IPNKKLETSI SLATQIALDK QQLSVDIAQL NAASITAAGK VGVNYATKIP QINADFQVGD
IDLDTLLPKT ETAAATEQAL AVSTQAVEPD LSALKQLDLK LKLTVKSIKV ANLSTQNWLM
DVGIKNGVLD LTKLNADLYQ GKLLVSAQVD ARQAVASYQF DKKVTGVQIR PLLKDAADVD
LLAGTANFDV KGKGRSLIPE QLKKNLLANG HFDINDGALY GVNIPQMIRS AQAKLKGDLS
PETKEERKTD FSSLTGSFSL DNGVATNPDL AMSSPLLRLA GKGTANLLTE ALDYRLTTSL
VNSLKGQGGS DKDALAGIDI PLAITGTFQK PEYALDTKAL LNNQLKEETD KAKEKLKDSL
LKKLGGF
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