Gene Shew185_1981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1981 
Symbol 
ID5373707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2360142 
End bp2361428 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content41% 
IMG OID640830185 
Producthypothetical protein 
Protein accessionYP_001366187 
Protein GI153000506 
COG category[V] Defense mechanisms 
COG ID[COG4268] McrBC 5-methylcytosine restriction system component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.51853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGCA ATAGGGTTAA CGATGTCACC GTGAGGGAGT TTGCATTATT AACTAACGGC 
GGCAACAACC ACAGCATAGA TTGTCACTCA ATCCCTAAGT CCGCGTTTGA GTGGTTGTTG
GCTAATGGTG TTAGTAAGAG CGAAGGTCAA CGTGAATTAG TCAAGGTGAA ACGTCACGGC
ACATCGGTTG CACTTCAAGT GATTAACTTT GTTGGTGTGC TTGAAACGCC CTGTAAGACT
CGCATTGAAA TCTTGCCTAA GACTTCAACC GATACTTGTG ATCCCGTTTC GGCCCGTAAA
ATTTTGCTAA AAATGTTAGC TCGTGTTGAA AAGTTAAAAC TTGAAGAGTT TCAACAATCT
CAATTACAAC TGTTGAAACA ACCACTTTAT GAGTTACTGA TCACGCACTT TCTGACAGCG
GTTTCTAAGC TAGTGAGGCA GGGTATTAGA AATGAGTACC AGCGTATTGA GCGTGAATCT
CCGTATCTAA AAGGCCAACT GCAAGTCGCT AAACAGCTGA GGCAACGTCC AGGACGGCAA
CATCATTTTC ATGTTGCACA TGATATCTAT AATGCTAATC GCGCTGAAAA CCGATTACTT
CATTCTTCAT TGAAACAAGT GTTGAAATGG TCTACTTCGA GTGCAAATCA AAGGTTAGCG
TGTGAACTGC TATGTGTATT TAATGAAATC GAGTTGTCTA CAAACCATGT TTTAGATTTT
AGGCTGTGGA AGGATGATAG GGGTCTTGCC CATTATCGTC CTTTAAAGCC ATGGTGTGAG
CTGATTTTGA GTTATCAGTC TCCAGTTGCC ATGGTAGGTA AGCATAATGG TTTATCTTTC
TTATTTCCGA TGGAACAACT CTTTGAGCGA TACGTTGCTA AGCAACTACA GCGGCAATTG
CCATCGGAAT TTAAGTTAAA ACAACAAGCG TCTAGTCATT GCCTGACTCA TCACAATGGC
AATGACTGGT TTAGGCTAAA ACCTGACATT GTGATTTATG ATAAATCGCG AATTGTCACT
GTGATGGATA CTAAATGGAA ACTGCTTGAT GCGTCGCTTA ATACGACCAA AGATAAGTAC
AATCTGAATC AAGCAGATAT GTATCAGCTA TATGCCTATG GCGAGAAATA CCTAAATGGG
CAAGGTGATT TATATCTGAT TTATCCGAAA CATGTCGGTT TTACTGAACC ATTGGCACTC
TTTGAGTTCA AGCCTGAATT AACGCTTTAT GTTGTGCCAT ACGATTTAGA AACTGACCAA
TGCCCTTTAC TCATGGCTTG CTCATAG
 
Protein sequence
MTRNRVNDVT VREFALLTNG GNNHSIDCHS IPKSAFEWLL ANGVSKSEGQ RELVKVKRHG 
TSVALQVINF VGVLETPCKT RIEILPKTST DTCDPVSARK ILLKMLARVE KLKLEEFQQS
QLQLLKQPLY ELLITHFLTA VSKLVRQGIR NEYQRIERES PYLKGQLQVA KQLRQRPGRQ
HHFHVAHDIY NANRAENRLL HSSLKQVLKW STSSANQRLA CELLCVFNEI ELSTNHVLDF
RLWKDDRGLA HYRPLKPWCE LILSYQSPVA MVGKHNGLSF LFPMEQLFER YVAKQLQRQL
PSEFKLKQQA SSHCLTHHNG NDWFRLKPDI VIYDKSRIVT VMDTKWKLLD ASLNTTKDKY
NLNQADMYQL YAYGEKYLNG QGDLYLIYPK HVGFTEPLAL FEFKPELTLY VVPYDLETDQ
CPLLMACS