Gene Shew185_1951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1951 
Symbol 
ID5372414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2332795 
End bp2334087 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content43% 
IMG OID640830155 
Productphage integrase family protein 
Protein accessionYP_001366157 
Protein GI153000476 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.46207e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGAAC TACCAAAGGG AGTCGAAAAG CTCCCTTCTG GCATCCATAT TCACGGTGAA 
ACGGTACGCA TTGATTTTCG TTACAATGGC GAACGTTGCC GTGAGCCATT GGCTGGCCAT
TACAAGATCA CTAAGTCTAC GATTAAGTAT GCTGAAAATA AGCGTACAAC GATTCTGACT
GAGATAGCCG AGAATCGATT CGACTATCTC GCCCACTTTC CTAACTCAGC AAAGGCGGCA
AGGTTTGCGG GGATCTGCCA GAAAAAACGT TATGTGGCAG AAGCGGTTAA GCTTTGGCTG
GATGTGCAAG AAGCTACAAA AGCCCAAAGC ACATTCAAAA ATTACAAAGT TAAAGCACAG
CACGTACTCA ATAAATGGGG AGACAGAAAG CTTACTGATA TCACCAAATC ACAAATGGAA
CTCTTTCAAG TTGAATTGCT GAAAAGTGGC CTAGCGCCAA AAACCGTAAA TGACATTTTC
ACTATCATTC GGGGCGTATG GTCAGAAGCT TTTCATGAAG GCACGCTCAA AACCAATCCA
CTTGATCGAG TGAGAAATAT CGAACGTGAC AACCTAGAAG AAACAGCTGA TCCGTTTACT
CGCGAAGAAC TGCTGTGCAT TGAGACGATA GACACATCAC GTCAGTGTGA TATCAACATG
ATCATGTTCT GGTGCTGGTC TGGATTATCA CTCTCAGAGA TCATCGCGCT GGCTTGGGAG
GATATAGATA CTGAGACTTG GACGGTGAAA GTACAGCGTG CGAAGGTGTT AAATCAATAT
AAGGTACCTA AAGAGCGTGG TCGCATACGT GTTATTGAGT TATTAGAACC TGCAAAGTTT
TGGCTGCAAC GCCAAATGGA ACACACCTTT AATCAGCATG CGACTAAATA CACCATAAAA
CAACGTGACA ACATTACGAA TAAACAAGAG AGTATTAGGC TCGTTTTTCT CAATGGGAAA
AGTGGTTTGC CTTGGTATGA TCATTCTGTT CGTCGCTGGT TTACCGGTAT TTTAAATGGT
GCCAAGTTAC GCCATCGTGG ACCGAATCAA TGTCGCCATA CCTTTGCAAG TCAGATGCTT
TCTAACTACG TACCACTTGA ATGGGTTGCA AGACAATTAG GCCATAGCGA TACCACAATG
ATTAAAAAAC ATTATGGCAA ATGGATACCT AAGGACTCAC TAAGAATGGC TAATCGTATC
TCTGAAATGA TGGGTTTTAG TGAGGATAAT AACGGACTAG AACACCCTGA AATGGTCCCA
AATAGGTCCC AGAGCAACAA AGGGAACCAG TAA
 
Protein sequence
MIELPKGVEK LPSGIHIHGE TVRIDFRYNG ERCREPLAGH YKITKSTIKY AENKRTTILT 
EIAENRFDYL AHFPNSAKAA RFAGICQKKR YVAEAVKLWL DVQEATKAQS TFKNYKVKAQ
HVLNKWGDRK LTDITKSQME LFQVELLKSG LAPKTVNDIF TIIRGVWSEA FHEGTLKTNP
LDRVRNIERD NLEETADPFT REELLCIETI DTSRQCDINM IMFWCWSGLS LSEIIALAWE
DIDTETWTVK VQRAKVLNQY KVPKERGRIR VIELLEPAKF WLQRQMEHTF NQHATKYTIK
QRDNITNKQE SIRLVFLNGK SGLPWYDHSV RRWFTGILNG AKLRHRGPNQ CRHTFASQML
SNYVPLEWVA RQLGHSDTTM IKKHYGKWIP KDSLRMANRI SEMMGFSEDN NGLEHPEMVP
NRSQSNKGNQ