Gene Shew185_1942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1942 
Symbol 
ID5370684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2318526 
End bp2319113 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content50% 
IMG OID640830145 
ProductNUDIX hydrolase 
Protein accessionYP_001366148 
Protein GI153000467 
COG category[R] General function prediction only
[L] Replication, recombination and repair 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.58411e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCAAG CGGAATTTAG ACTCAGATTT AATCTGCACC CTTTAGCGCT GCAAGATCCG 
GCGGCCTTCC CACACCTTGG ACTGCGCAAA GCTGCGGTGT TGATCCCGCT GCAGGATATC
AACGGTGAAC TAAATCTAAT TTTAACCCAA AGACCGATGC ACCTTCGCGC CCATCCAGGA
CAGATCAGTT TCCCCGGCGG TAAAATTGAG CCCTACGATG TCGATGCAAT TGCGGCTGCG
TTAAGGGAAG CTGAAGAAGA AATTGGATTA TCGCGGTATA ACGTCGATGT GGTGGGCACA
TTTCCGGCCC ACAATACCTT TACCGGATTT GAAATCACGC CCGTGGTCGG CATTATCAAG
CAGGCCTTTG ATTGGAAACT CGATCCCGGT GAGGTAGCCG ATTGCTTTAC TGTGCCATTA
AGCTTTTTTA TTGAGCCGAG CAATCGTCAC CAAAAACGCT TTTTACGCCA AGGGCGCTAC
TACAGCGTGC ATTTCATACC CTATCAACAA CGCTTTATCT GGGGCGCGAC CGCCGCCATT
ATCGACCATT TATGCCGCCA GTTAAGCATT CCTGCGGATA TCCTCTGA
 
Protein sequence
MDQAEFRLRF NLHPLALQDP AAFPHLGLRK AAVLIPLQDI NGELNLILTQ RPMHLRAHPG 
QISFPGGKIE PYDVDAIAAA LREAEEEIGL SRYNVDVVGT FPAHNTFTGF EITPVVGIIK
QAFDWKLDPG EVADCFTVPL SFFIEPSNRH QKRFLRQGRY YSVHFIPYQQ RFIWGATAAI
IDHLCRQLSI PADIL