Gene Shew185_1919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1919 
Symbol 
ID5371055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2286448 
End bp2287353 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content50% 
IMG OID640830122 
ProductApbE family lipoprotein 
Protein accessionYP_001366125 
Protein GI153000444 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000213083 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGACAT CATCCCTAAA AACCGCACTT TATTCGCTGC AACGCCGTGA TTGGGGTTAT 
GTGGGCGAAT TTAGGGCCAT GGCGAGTCCC TGTGAAATAC TCATTGCATG TGATCAACTC
GATATCGCCG ACGATATGTT GGATATGGCC GTCACTGAGG CGCTGCGTAT TGAACATAAG
TACAGTCGCT TTATTGCGCA GAATTGTCTG TGGCAATTAA ACCATGCCTA TGGTCATAAG
CAGCTTATCG ATGAAGAAAC CTGGCAGTTA TTGGCTTTTG CCAAACAATG TTTTCAGCTC
AGTGATGGAC TATTTGATAT CTCTGCAGGG CCGTTAATGG AACTGTGGCG CTTTGATCCC
AAAGCCCAAT TGCCCGAACA TGCCCGCATA CTTGCCGCTA AAGCCTTAGT GGGGTTTGAG
CGTATCGAGT TTGATTCGCG CCATATTGAG ATGCCAACGG GAATGAAATT GGATTTTGGC
GGCGTTGCTA AGGAATATGC AGTCGATAGA GTCGCCTATG AGTTGGCTGA ATGTTATCCA
GATATTCCTG TGCTAGTGAA TTTTGGTGGC GATATCGCCT GTCCTGTGCC CAAAGTGAAC
CCATGGCAGG TGGGCATTGA AGATCCTCGC CATCTCGATC GCGCCGCCAG TGTACTGGCG
ATCAGTCAGG GCGCATTAGC GACCAGCGGC GATACACGGC GCTTTTTTGA AGTAGATGGA
AAGCGTTACG GCCATATTGT CGATCCGCGT ACTGGCTATC CCGTCGTCCA TGCGCCGCGC
TCCGTGACTG TGTTAGGACC AAACTGTGTG ACCGCTGGAA TGCTGGCGAC TATGGCCATG
CTACAGGGCC AGGATGCGGA AGCATTTTTA CAGCAACAAG ATGTTAAGTT TAGTATTTTC
CGTTAA
 
Protein sequence
MSTSSLKTAL YSLQRRDWGY VGEFRAMASP CEILIACDQL DIADDMLDMA VTEALRIEHK 
YSRFIAQNCL WQLNHAYGHK QLIDEETWQL LAFAKQCFQL SDGLFDISAG PLMELWRFDP
KAQLPEHARI LAAKALVGFE RIEFDSRHIE MPTGMKLDFG GVAKEYAVDR VAYELAECYP
DIPVLVNFGG DIACPVPKVN PWQVGIEDPR HLDRAASVLA ISQGALATSG DTRRFFEVDG
KRYGHIVDPR TGYPVVHAPR SVTVLGPNCV TAGMLATMAM LQGQDAEAFL QQQDVKFSIF
R