| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1914 |
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| Symbol | |
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| ID | 5370774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2280952 |
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| End bp | 2282655 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640830117 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001366120 |
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| Protein GI | 153000439 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.392356 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGC GCGTTGTTAT CGACCCTATC ACACGTATCG AGGGTCACTT ACGTATCGAA
GTTGAAGTTG ATGAAAAGAA CGTCATCAGC AAGGCTTGGT CATCCTCCAC ACTCTGGCGC
GGTATTGAAG TCATTCTCAA GGGCCGTACA CCTATGGATG TTGGCCTTAT TGTGCAACGT
ATCTGTGGTG TCTGTACCTA TTCCCACTAC CGCTGCGGCA CTGAAGCGGT TGAGAACGCT
CTGGGAATTC AAATTCCGTT GAACGCGAGA TACTTACGTT CATTGATGCA AACCTCTTTA
TACATGCATG ACCATATTGT GCATTTCTAC CATCTACACG GTCTTGATTG GGTGGATGTG
GTGTCTGCAC TGAGCGCCGA TCCGGCCAAA GCTGCACAAG TTGCGCTGCA ATACACAGAC
AAACCCATAG CCGCGGGTGA AGGTGATTTA AGAGCCGTGC AAGAAAGAGT CAAAGGCTTT
GTCGAAACCG GTAAATTAGG CCCCTTTGCC AACGCTTATT GGGGCAATGG CACCTATAAA
TTTACTCCAG AGCAAAACCT TATCGCGCTG TCTCACTACC TTAAAGCACT TGAAGTACAA
CGTGTTGCGG CAGAAATGCT GGCCATCTTT GGCGGTAAAT CTCCACATCC ACAATCCGTT
GTTGTTGGTG GTGTGACGTC GGTGCGTGAC ATGTTAAGCC CTGCTCGCCT GCAGGAATGG
AAGCAAAAAC ATGCGACCGT GACTGACTTT ATCCTGCGTG CTTATCAAGC GGATATCGTA
ATGGCGGCCG AAGCCTTTGG TACTGAGCCA AGCGTGCTGG GCGGCGTGAA TGTGAAAAAC
TTCATGGCGA CCGATGACTT TGTGTTAGCC AATGGCGAAT ACATGTTCAA TCAAGGCGTG
ATCATGAATG GCGACCTTGC CGGTGTCAGC GATGTAAACC CAGATCTGAT TGCTGAAGAC
GTTAGCCATG CTTGGTATAG CGCCGATGCG CCGCAGCATC CCTATGACGG TACAACGATT
CCTAATTACA CTGGTTTTGT TGAACGCGAT ACCGTCTACG GCAAATTGCC AACACTGGAT
GGTGATGGTA AATACTCTTG GGTGAAATCC CCCCGTTATC AAGGTGAACC CGTCGAAGTG
GGCCCATTAG CCTGCCTATT AGTGAGTTAT GCCCGTGGTA ACAAAGTGGT TGTGGATTCA
GTCAATGCCC TGCTTGCTCG CACAGGCTTA CCCGTTGCCG CCCTATTTAC CACTTTAGGC
CGCACCGCTG CCCGTATGTT ACAGACAGTT ATCGTCGCCC AAGAAGGATT AAAAACCTTC
GATGCGCTGC TGACAAATAT CCAGTCTGAT GAATCAACTT ATGTAAAACC CAATATCGAC
CCGAGCAAAG AGTACATAGG TCACGCCATG ATTGAGGCGC CACGCGGCAT GTTAAGCCAC
TGGATCCGCA TAAAAAATGG AGTGATTGAG AACTATCAAG CCGTAGTACC GACGACCTGG
AACGCAGGAC CTGTGGATGC CAACGGTAAA ATGGGTCCCT ATGAAGCCTC TTTAATTGGC
TTGAAACTGG AAGATCCAAC TAAGCCCCTT GAGGTGATAC GTATTATTCA CTCATTTGAC
CCTTGCATGG CGTGTTCTGT ACACGTGATG GATTTTAAAG GTCAGGCATT GAGCGAGTTC
CGTGTCAGTC CCAATGGTCA ATAA
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| Protein sequence | MSKRVVIDPI TRIEGHLRIE VEVDEKNVIS KAWSSSTLWR GIEVILKGRT PMDVGLIVQR
ICGVCTYSHY RCGTEAVENA LGIQIPLNAR YLRSLMQTSL YMHDHIVHFY HLHGLDWVDV
VSALSADPAK AAQVALQYTD KPIAAGEGDL RAVQERVKGF VETGKLGPFA NAYWGNGTYK
FTPEQNLIAL SHYLKALEVQ RVAAEMLAIF GGKSPHPQSV VVGGVTSVRD MLSPARLQEW
KQKHATVTDF ILRAYQADIV MAAEAFGTEP SVLGGVNVKN FMATDDFVLA NGEYMFNQGV
IMNGDLAGVS DVNPDLIAED VSHAWYSADA PQHPYDGTTI PNYTGFVERD TVYGKLPTLD
GDGKYSWVKS PRYQGEPVEV GPLACLLVSY ARGNKVVVDS VNALLARTGL PVAALFTTLG
RTAARMLQTV IVAQEGLKTF DALLTNIQSD ESTYVKPNID PSKEYIGHAM IEAPRGMLSH
WIRIKNGVIE NYQAVVPTTW NAGPVDANGK MGPYEASLIG LKLEDPTKPL EVIRIIHSFD
PCMACSVHVM DFKGQALSEF RVSPNGQ
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