Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1913 |
Symbol | |
ID | 5371363 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2280258 |
End bp | 2280932 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640830116 |
Product | Ni/Fe-hydrogenase, b-type cytochrome subunit |
Protein accession | YP_001366119 |
Protein GI | 153000438 |
COG category | [C] Energy production and conversion |
COG ID | [COG1969] Ni,Fe-hydrogenase I cytochrome b subunit |
TIGRFAM ID | [TIGR02125] Ni/Fe-hydrogenase, b-type cytochrome subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.400664 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACCATT CTGCAACCCG CATTCGGACA CTGGTTTTTA GTCCGGCAAT ACGGATTTTC CACTGGCTCA GGGCACTATC AATTTTAGTG CTGGTGATCA CCGGATTCTA TATTGCTTGG CCGTTTCTTG TGGCGCCTGA AAGTACGGAT GTGCTCGTAC AAGGCTGGAT CCGCTTCGCG CATCTGATCT GCGGTTTTGT ATTGACCGCC ATCACCTTAG TCCGCTTCTA CCTGTATTTT TTCAGTCGAA GCGACATTGA GCGGCGATCA TTTCGCGATG TGATGAGTGT AAAAAGCTGG ATCACTCAGC TGAAATCTTA CTTATGGATG GGTCACTTAC ATAAAGCGGG TGTGTATGGA CCGCTGCAAT TTGTGACTTA TGTAGCAATC TCACTGGTCG CTCTCGTGAT ATGTATAACG GGTCTGGTGT TGTACGCCAA TGTGTATCAC CAAGGTTTAG GTGGGATGCT TTGGGGCAGC GCCGCTTGGA TTACGGCACA AATGGGTGGG CTGGCACAGG TTAGGATTTT CCATCACTAC TTAACTTGGG CATTTGTTAT CTTTGTGGTT ATCCACGTCT ATATGGCGGT TTGGTCAGGG ATACGCTTCA AACATAACTC AGTTGACTCG ATTGTCTCTG GCTATGACTA CCCAAAGCCA GACTCACACC ACTAG
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Protein sequence | MNHSATRIRT LVFSPAIRIF HWLRALSILV LVITGFYIAW PFLVAPESTD VLVQGWIRFA HLICGFVLTA ITLVRFYLYF FSRSDIERRS FRDVMSVKSW ITQLKSYLWM GHLHKAGVYG PLQFVTYVAI SLVALVICIT GLVLYANVYH QGLGGMLWGS AAWITAQMGG LAQVRIFHHY LTWAFVIFVV IHVYMAVWSG IRFKHNSVDS IVSGYDYPKP DSHH
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