Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1892 |
Symbol | |
ID | 5372913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2257638 |
End bp | 2258747 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640830095 |
Product | ribonuclease D |
Protein accession | YP_001366098 |
Protein GI | 153000417 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0349] Ribonuclease D |
TIGRFAM ID | [TIGR01388] ribonuclease D |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000000212189 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTCAGCGT TTCAATATGT GAGTGATGAA GCAAGCCTTA ATGCCCTCGT TGCCCAATAT AAACAGAGTA AGATACTCGT GTTAGATACC GAGTTTGTTC GTACTCGTAC TTATTATGCC AAGTTAGGTT TGATCCAAGC CTATGATGGT AAAACCTTAG CTTTGATTGA TCCTGTGGCT TTACCTGATT TAGCCCAGTT TTGGGCGCTG TTATCGGACC CGAATATCAT TAAGTTAGTG CATTCCTGCA GTGAAGACTT AGAAGTGTTT GCCCATTATG GTAAATGTCA GCCTACGCCT TTGTTTGATA GCCAAATTGC AGCTTCTTTG TGTGGAATGG GCCATGGTGT AGGTTATGCC AAGTTAGTTG AAACTTGCCT TGGTGAAGTG ATCGATAAAG GTGAGTCACG TACCGATTGG ATCCGCCGCC CTTTAACGGA AGCACAGTTA AGCTACGCCG CGAATGACGT CTTGTACTTG TATCAGCTCT ATCCTCAACT TGAAGCGAAA CTCAGCGCCC AAGGGCGTTT AGCTTGGTTA TACGAGGAAG GGGAAAGGAT GACCCAGGGC AGGCTTGCCG ATCCTGATCT CGACACGGCT TATTTGAAAG TGAAAAATGC TTTCCAACTA ACCGAAATCC AATTGGCTTA CCTTAAAGTG CTTGCTAAGT GGCGTCTTGA AAAAGCCTTA GTGCGTGATT TAGCCCTAGG TTTTGTGGTC AAAGATCATG GCCTTATCGC ATTAGCGAAG AAGCAACCTA AATCCTCGGC TGACTTGTTT AAGCTCAATG ATTTGACTGA GCAAGAAAAA CGTATCCACG GCAAAGATCT ATTACGTGTG CTGCAAACCG CTGATTTGGT CAATTTACCC GAATTAGTGG ATGTGTTGGC GTTGAAGTCG GGCTACAAAT CGGCCTTTAA GGCGATTAAA AGCTGCTTAG TCGAGTTGTG CGAACAGCAT GATGTGCCGC AGGAAATGCT CGGTTCTAAA CGTCATATCC ATGAGTTTTT GCAATGGCGT TGGGATAAGC AACAAGGGGA TTTGCCCGCT GTGTTATGCG GATGGCGGGG CGAGATTGCC GCTGAGTCCC TAGCTAAGCT TGAGGTCTAA
|
Protein sequence | MSAFQYVSDE ASLNALVAQY KQSKILVLDT EFVRTRTYYA KLGLIQAYDG KTLALIDPVA LPDLAQFWAL LSDPNIIKLV HSCSEDLEVF AHYGKCQPTP LFDSQIAASL CGMGHGVGYA KLVETCLGEV IDKGESRTDW IRRPLTEAQL SYAANDVLYL YQLYPQLEAK LSAQGRLAWL YEEGERMTQG RLADPDLDTA YLKVKNAFQL TEIQLAYLKV LAKWRLEKAL VRDLALGFVV KDHGLIALAK KQPKSSADLF KLNDLTEQEK RIHGKDLLRV LQTADLVNLP ELVDVLALKS GYKSAFKAIK SCLVELCEQH DVPQEMLGSK RHIHEFLQWR WDKQQGDLPA VLCGWRGEIA AESLAKLEV
|
| |