| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1883 |
|---|
| Symbol | |
|---|
| ID | 5370025 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | - |
|---|
| Start bp | 2248370 |
|---|
| End bp | 2249209 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640830086 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_001366089 |
|---|
| Protein GI | 153000408 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3491] Isopenicillin N synthase and related dioxygenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.251899 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAG AAACCATTGA TTACCGCGCT GAAAACAGTG CCCAGCAATT CGTTGAATCA
CTTAGGGAAA CTGGCTTTGG TGTTTTATCT AATCATCCGA TTGATAAGCG CTTAGTTGAA
AACATCTACA CCGAGTGGCA AGCCTTTTTT AACTCAGAAG CCAAAAACGA CTACATGTTT
AAAAAGGAAA CCCACGACGG TTTCTTCCCC GCATCGATTT CTGAAACTGC CAAAGGCAAC
ACAGTCAAAG ACATTAAAGA GTATTACCAC GTGTACCCTT GGGGGCGGAT CCCCGATTCA
CTGCGTGCCA ATATTCTCGC CTATTACGAC AAAGCCAACG CGCTGGCCGC TGAGCTCTTA
GAGTGGATAG AAACCTACTC ACCCGAAGAC GTAAAAGCCA AGTTTTCGAT GCCATTGCCA
GAAATGATCG CCAACAGCCA AAAAACCTTA CTGCGCATTC TGCATTACCC GCCGATGACA
GGCAGTGAAG AAATGGGCGC CATTCGCGCT GCAGCCCACG AAGATATCAA CCTTATCACT
GTGTTACCTG CCGCCAATGA GCCAGGACTG CAAGTGAAAG CCAAAGATGG AACTTGGTTA
GATGTCCCCA GTGATTTTGG CAGCATCATT ATCAATATCG GTGACATGCT ACAGGAAGCG
TCTGGCGGCT ATTTCCCGTC GACGTCACAT CGCGTCATCA ATCCTGAAGG TACGGATAAA
ACCAAGCCAA GGATCTCTTT GCCGTTATTT TTGCATCCAA ACCCTGCTGT CGTGCTGTCT
GAGCGTTATA CCGCCGACAG TTATCTGATG GAAAGACTGC GCGAGCTTGG CGTTATTTAA
|
|---|
| Protein sequence | MKLETIDYRA ENSAQQFVES LRETGFGVLS NHPIDKRLVE NIYTEWQAFF NSEAKNDYMF
KKETHDGFFP ASISETAKGN TVKDIKEYYH VYPWGRIPDS LRANILAYYD KANALAAELL
EWIETYSPED VKAKFSMPLP EMIANSQKTL LRILHYPPMT GSEEMGAIRA AAHEDINLIT
VLPAANEPGL QVKAKDGTWL DVPSDFGSII INIGDMLQEA SGGYFPSTSH RVINPEGTDK
TKPRISLPLF LHPNPAVVLS ERYTADSYLM ERLRELGVI
|
|---|
| |