Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1853 |
Symbol | |
ID | 5370682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 2215127 |
End bp | 2215792 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 640830056 |
Product | putative prophage repressor |
Protein accession | YP_001366059 |
Protein GI | 153000378 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0159907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATAA GTTGGATTGA TCTGGTTAAA ACCAGAATGA AAGAGGCTGG GGTAACTCAG TCAATGCTTG CTGAAAAGAT GGGAATGTCT CAGGGCGCCA TCGCTCACTG GTTAGGTGGG AAAAGAAAGC CAAGCATTGA AGACATTGCA TCCATGATGA ATATCGTGGG GATTCGTCAC ATGACTTTAG GGGCTGATGG ACTGATTGAT TACCCTGATT CTGTGTTAGG TAACACTGAG GAATTACCAG CGAAGATATC CTATGTAAAT TCATTCCCAG TTATCAGTTA TGTCCAAGCT GGCGCTTGGA CTGAAGCTGT TGAATCCTGT CCAGCCTCTG CATTGGATGA ATGGCAAGAC ACCACAGAGC GCACGAGCGA AAACTGTTTT TGGCTACGCG TTCAAGGTGA CTCTATGACG ACACCGGCAG GCATTAGTTT TCCTGAAGGC ACGCTTATTT TAATTGATGC GGAAAAAGAC TATCAAAATG GCTCATTCGT TGTTGCTAAG CTAACTGATA TCAACGAAGC GACCTTTAAA AAACTAGTGA TAGATGCAGG GCAAAAGTTT CTACGGCCAT TGAATACTGC TTATCCAACT CTGCCAATCA ATGGTAACTG TAAAATAATA GGCGTCGTTG TAGACGCAAA AATGAAAATT TTTTGA
|
Protein sequence | MKISWIDLVK TRMKEAGVTQ SMLAEKMGMS QGAIAHWLGG KRKPSIEDIA SMMNIVGIRH MTLGADGLID YPDSVLGNTE ELPAKISYVN SFPVISYVQA GAWTEAVESC PASALDEWQD TTERTSENCF WLRVQGDSMT TPAGISFPEG TLILIDAEKD YQNGSFVVAK LTDINEATFK KLVIDAGQKF LRPLNTAYPT LPINGNCKII GVVVDAKMKI F
|
| |