Gene Shew185_1853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1853 
Symbol 
ID5370682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2215127 
End bp2215792 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content43% 
IMG OID640830056 
Productputative prophage repressor 
Protein accessionYP_001366059 
Protein GI153000378 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0159907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA GTTGGATTGA TCTGGTTAAA ACCAGAATGA AAGAGGCTGG GGTAACTCAG 
TCAATGCTTG CTGAAAAGAT GGGAATGTCT CAGGGCGCCA TCGCTCACTG GTTAGGTGGG
AAAAGAAAGC CAAGCATTGA AGACATTGCA TCCATGATGA ATATCGTGGG GATTCGTCAC
ATGACTTTAG GGGCTGATGG ACTGATTGAT TACCCTGATT CTGTGTTAGG TAACACTGAG
GAATTACCAG CGAAGATATC CTATGTAAAT TCATTCCCAG TTATCAGTTA TGTCCAAGCT
GGCGCTTGGA CTGAAGCTGT TGAATCCTGT CCAGCCTCTG CATTGGATGA ATGGCAAGAC
ACCACAGAGC GCACGAGCGA AAACTGTTTT TGGCTACGCG TTCAAGGTGA CTCTATGACG
ACACCGGCAG GCATTAGTTT TCCTGAAGGC ACGCTTATTT TAATTGATGC GGAAAAAGAC
TATCAAAATG GCTCATTCGT TGTTGCTAAG CTAACTGATA TCAACGAAGC GACCTTTAAA
AAACTAGTGA TAGATGCAGG GCAAAAGTTT CTACGGCCAT TGAATACTGC TTATCCAACT
CTGCCAATCA ATGGTAACTG TAAAATAATA GGCGTCGTTG TAGACGCAAA AATGAAAATT
TTTTGA
 
Protein sequence
MKISWIDLVK TRMKEAGVTQ SMLAEKMGMS QGAIAHWLGG KRKPSIEDIA SMMNIVGIRH 
MTLGADGLID YPDSVLGNTE ELPAKISYVN SFPVISYVQA GAWTEAVESC PASALDEWQD
TTERTSENCF WLRVQGDSMT TPAGISFPEG TLILIDAEKD YQNGSFVVAK LTDINEATFK
KLVIDAGQKF LRPLNTAYPT LPINGNCKII GVVVDAKMKI F