| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1838 |
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| Symbol | |
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| ID | 5372434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 2204585 |
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| End bp | 2205532 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640830041 |
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| Product | DNA ligase |
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| Protein accession | YP_001366044 |
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| Protein GI | 153000363 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00105408 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTCATA CCAGCCCGTT ACAAGATTTA ACATTTCATC GGTTTATCCG CTTTCGTTTT
TTCAAACAAC GCCTGCTCTT ACTCAGTCTG CTGATATTCG GTTGTTTAGC CCCAGTGACC
TATGCGCAAA ACTCTCCACC TTCGATACAG TTGGCAACTG AGTTTGATGC CCAGCAAGAG
ATTCATATTC AGGACTTTTT GATTAGCGAA AAACTCGACG GGGTGCGAGG TTACTGGAAT
GGTCAGGCAC TATTGACCCG GCAAGGTAAT CTTATTGCTG CTCCGACATG GTTTATCGCG
AATTTCCCGA ATTATCCCCT CGATGGTGAG TTATGGCTTG GGCGAGGCCA GTTTGAGGCT
ATGTCGAGCA TAGTTCGACA AACCTCAGCC AAGGATGATG ACTGGCGCAA AGTGCGATTT
ATGGTGTTCG ATGTTCCCAA GGCGGGTGGC GACTTTCAGC ATCGCTATCA ATTTGCGTTA
ACTAAACTGA GTGGCAAATC GCATTATCTT GAAGTCATAG CGCAGTTCCA AGTGGACAGT
CTTGAAGCTC TGTATCAAAA ACTTGATAGC TTAGTTGCTA AAGGCGCTGA AGGATTAATG
CTGCATCGCA GCTCCGCGAT GTATGTCAGT GGCCGCAATC CTAATTTGAT GAAATTAAAA
CCCTATTATG ATGCTGAAGC GACAGTGATC GGCCATATAC CAGGGAAAGG TCAATTTGCA
GGGCAAATGG GTGCAATAAG AGTGCAAACC CCAGACGGCC GGATTTTCAA CATAGGCACA
GGTTTTAATC TCGCAGAGCG TCAGCATCCT CCCGCTGTGG GTGCAATCAT CACCTATAAA
TATCTGGGTC TTACCGTAAA TGGCTTACCC AGATTTGCCA GTTTCCTGCG GGTACGCGTC
GATTTAGATG AGAGTAATAA AGTCATTTCA TCGCAAGAAG GAAACTAG
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| Protein sequence | MTHTSPLQDL TFHRFIRFRF FKQRLLLLSL LIFGCLAPVT YAQNSPPSIQ LATEFDAQQE
IHIQDFLISE KLDGVRGYWN GQALLTRQGN LIAAPTWFIA NFPNYPLDGE LWLGRGQFEA
MSSIVRQTSA KDDDWRKVRF MVFDVPKAGG DFQHRYQFAL TKLSGKSHYL EVIAQFQVDS
LEALYQKLDS LVAKGAEGLM LHRSSAMYVS GRNPNLMKLK PYYDAEATVI GHIPGKGQFA
GQMGAIRVQT PDGRIFNIGT GFNLAERQHP PAVGAIITYK YLGLTVNGLP RFASFLRVRV
DLDESNKVIS SQEGN
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