| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1800 |
|---|
| Symbol | |
|---|
| ID | 5371402 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 2161994 |
|---|
| End bp | 2162542 |
|---|
| Gene Length | 549 bp |
|---|
| Protein Length | 182 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640830003 |
|---|
| Product | nitroreductase |
|---|
| Protein accession | YP_001366006 |
|---|
| Protein GI | 153000325 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0778] Nitroreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.493936 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGACGCTA TTGAACTTTT GCTCACCCGT CAATCGACCC CGCGATTAAT CGCTCCCGCT
CCCGATGCGA GTCAATTAAA AATCATCTTA GATGCCGCCA TTCGTGTGCC AGATCATGGT
GCCTTAGCCC CATGGGAATT TATTATTGCC ACTGACCAAG GGTTAAACAC CTTAGCCGAT
ATCTTTGTTG AGGCGGCTAA AGCGAGTGGC GCCGATGAGG ATTTCGTTAA TAAAGCTAAG
GGCATGCCAA TGCGTGCGCC TATGGTGATT ACCGTGGTGG CGAAAACGCA GCAACATCCT
AAAGTACCAG TACTTGAACA ACTAATTGCA GCGGGCTGCG CAACGATGGC GATGCAACAG
GCGGCTTTTG CCTTAGGCAT AGGCGCTGTA TGGCGCACGG GTGATTTTGC TTTCGATGCC
AATGTGAATG CCGCCTTAGG CCTTGAGCCA CACGATCAAA TCGTCGGCTT TTTGTATGTC
GGTACGCCAG CGGTTGTGGC ACCCCAAAAA CCGCAAAAGG ACGGCAGCCA ATACGTCCGT
TATTTATGA
|
|---|
| Protein sequence | MDAIELLLTR QSTPRLIAPA PDASQLKIIL DAAIRVPDHG ALAPWEFIIA TDQGLNTLAD
IFVEAAKASG ADEDFVNKAK GMPMRAPMVI TVVAKTQQHP KVPVLEQLIA AGCATMAMQQ
AAFALGIGAV WRTGDFAFDA NVNAALGLEP HDQIVGFLYV GTPAVVAPQK PQKDGSQYVR
YL
|
|---|
| |