Gene Shew185_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1749 
Symbol 
ID5371541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2104748 
End bp2108188 
Gene Length3441 bp 
Protein Length1146 aa 
Translation table11 
GC content50% 
IMG OID640829952 
Productintegral membrane sensor hybrid histidine kinase 
Protein accessionYP_001365955 
Protein GI153000274 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0353406 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA CCTTAGTCGT CGCCGTTATT GCCGTCTGTT ATGTCTCGCT TTTATTCCTA 
TTAGCGTGGG GGGCGGAGCG TTGGTTTAGC CGGATCACCA AAAAGCTACA GGTCGGTATT
TATGGCCTGA GCTTAGCGGT CTACTGCTCT TCGTGGAGCT TTTTAGGCAC AGTTGGCCAA
TCGGCTAAGG ATCTCTGGTC TTTTTTACCG ATTTTTATCG GCCCCATTCT GATTTTTACC
TTAGGTTTTG GCATGTTACG CAAGATGGTA TTAGTGTCTA AGGCACAAAA TATCACCTCA
GTGGCCGACT TTATTGCCGC CCGATACGGC AAATCCCAAA CCTTAGCCGC CTTAGTCACC
TTAATCGCCT TGTTTGGCAT CATGCCCTAT ATCGCCCTGC AGCTTAAGGC GATGGTGTTC
AGCCTTAACC TGTTTCAACC CGCCGACGAT CCCCTCGATG GCGTGACGAT TCCGTTACTG
ATCACGTCTT TGTTAGCCAT ATTTGCCATT TTATTTGGTA CCCGCAAACT CGATGCCACC
GAGCACAATC CCGGCATGAT GCTTGCGATT GCCTTTGAGT CTCTGGTGAA GCTCGCCGCA
TTTTTATTGG TCGGCGTCGT CATTAGTTTT GGGGTGTTCG ATGGTTTTGG GGATATTTGG
CAGCAGGCGA ATGCGCAGTC GCTGATCAAT TATCCCAATC CCCGTATCGA AGCTTTAATG
CCTGAGTTAC TTGTCGGAAT GGCGGCGTTT TTGTGTATGC CAAGGCAGTT CCATGTGATG
GTGGTGGAAT GCGCCGATGA GTCTGTGCTG TCGAAAGGAC GTTGGCTATT TCCTATCTAT
TTAGCGCTTT TTGGTTTATT CGTTGGGCCA CTCGCCTTGG CGGGGAAAAT TATCCTCGGC
GATTCTGTGT CGGCCGATAC CTATGTGATT AATCTACCAC TCGCCTTAGA CCAACCTTTG
CTGGCGGTGA TTGCGCTGCT GGGCACACTT TCGGCGGCAA CCGGCATGGT GATAGTGGCG
GTGGTGACTA TTAGTGTGAT GGTGAGTAAC GAATGGCTAG TGCCCGTGAT GCTGCGGACG
GGCCATATCC GTGAGAAAAA CTTCAGCCAG TTCTCGCAGC TACTACTCAA TGCCCGCCGT
TTGGCGATCG TGATCATTCT TGGCTTAGGT TATGGCAGTT ATCTGGCCTT AGCCGACAGT
GATTCCTTAT CCCATCTCGG CATGTTGTCC TTCGGGGCTT TTGCTCAGTT AGCGCCTGCC
TTAGTGGGCG GTCTCTATTG GAAACACGGC AATCGTGCTG GGGTGTTTTT AGGACTCGGC
GTCGGCTTTA CGCTGTGGTT TTACATCATG TTGCAGGGCA TGACAGATGT GCAAAGTTCA
TCGGTGTTCT TGTCTGGCGT CGCGAGCGAG AAAGGCCTGC TAGATGCGAT AACGCCCAAT
GTGCGTGATG CGCTGACGGC ACTTTTTGCC AATATCGCCT GTTATATTTT GGGGTCGATT
TGGTTTAGGG CGGGTGTGGC CGAGCGTATT CAGGCCAGTG CCTTTGTCAG TCCTGGCAAG
TTGAAAAACA GCGCCAATAA GAAAAATGGC CCGATTTCAC AGCAGGATTT GCTTATTCTA
GCCAGTCGAT TCGTCAGCCC AACGCGCGCC TATGAAAGCT TTAGCCGTTT CTCAATTGAC
GCCGTAAAAA GTGATAGTTG GCATAAAGCG GCGCCGCCAG AGCTGATTTT CCACACGGAA
CGTTTATTAG CGGGCGTACT CGGCGCCTCA AGCGCGTCGC TGGTGATGGA TTCTGTGCTG
CAAGGGCGTG ATTTGGCGCT GGATGAAGTG TTCAGTCTAG TGGATGAAGC ATCATCCAAA
ATTATGCTCA GCCAAGACAT GCTGCGCGGC GCGATTGAGC ACGCCTATGA AGGCATGAGC
GTGATAGATA ACGATCTTAA CCTAGTAGCT TGGAATTATA AATATGTGGA GCTGTATCAA
TATCCCGATG GATTCTTGCA GCAGGGTATG CCCATCAGCG AAGTGATCCG TTTTAATGCG
GCGCGGGGTT ATTGTGGTGA AGGTGAAATC GAACAGCAGG TTGAACAGCG GGTGCAGCAC
ATGCGTAATG GCACGCCGCA CACTTCTGAG CGCCATCGCA GGGACGGTAA AGTGATTAAA
ATTCAAGGTA ATCCCATGCC AGACGGTGGC TTTGTGATGA CCTTTACCGA TATTACTCAG
TATCGCGAGC AGGAGCGCGC GCTGCTCGAA GCCAATGAAA CCTTAGAAAG CCGCGTTAAC
GAACGTACCT ACGAATTAGC CATGTTGAAC AGTGAGTTAC TCGAGGCTAA AGCGCAGGAA
GAAATCGCCA ACGCCTCTAA GAGTCGCTTC TTGGCCGCCG TTGGCCATGA CTTAATGCAG
CCACTAAATG CCGCGCGGCT GTTTACCGCA TCTTTATCTC AGTATCCCAA TTTAGATCGC
GAGGCCAGAA CCACCTTATC CCATGTGAAT AGCTCGCTTA AGATAGCCGG CGAGTTGCTC
ACCGATCTGC TGGATATCTC TAAACTCGAT TCTGGCATGG TTGATGTCAA TCGGCGTGAC
TTTGCGATTT CAGAACTGAT CAATGGCTTA TCCGTGGAGT TTGAAGCGAT GGCAGCGGAC
AACCAAATCC GTTTTAAGAT GATCCCATGC AGCGCGACCG TTAATTCCGA TCCTTCGCTG
TTACGGCGTG TCCTACAAAA CTTTTTAACC AATGCCTACC GTTACGCCCG TGGCGGCAGA
GTCTTGTTTG GTTGTCGCCA TCGCGGTCAT TATCTTGAGA TCCAAGTATT AGACACGGGC
TGTGGTATCG ATGAAAAGGA AACCCAAGAA ATTTTTAAAG AATTCAAACG GCTGAATAAT
CCTAAGAGCA ATAATGTCAG CGGCTTGGGC TTAGGTTTAG CGATTGCCGA TCGTATCAGT
AAAGTGTTAG AACACGGTAT TCAAGTCTCG TCCCATTTAG GGCGCGGCTC GGTATTCTCT
ATTTGTGTGC CGCTCGGGGA GACTGTACGC CAGCCACAAG TGAAGGCGTT GCCATCGCTG
TTGCAACCAT TATCGGGTAT CAAAGTGTTG TGTATCGATA ACGAAGAGGC GATTCTGGCT
GGCTTAGAAA GTCTATTAAG TCGTTGGCAA TGTGAGGTTA TTTGCGCCAA AGATTTATCC
GATGCACGCA TTAAGCTGGG GCTGAAAGGC GTCGCGCCCG ATATTGTCCT CGCCGATTAT
CACTTAGATG ATGGCCAAAA TGGCGTCGAT GCGATGGACG GTATTCGTGC CCTGTATGGC
AAAGACTTGC CCGGCATTTT GATCACCGCC AATACCCGTA AAGAGCTGGT GGAAGATGTG
CAACGCCGCG GCTATCACTA TATGGCGAAA ATGATAAAAC CTGCCGCGCT GCGCGCCTTG
ATTTCTAGCT TAGTGAAATG A
 
Protein sequence
MNLTLVVAVI AVCYVSLLFL LAWGAERWFS RITKKLQVGI YGLSLAVYCS SWSFLGTVGQ 
SAKDLWSFLP IFIGPILIFT LGFGMLRKMV LVSKAQNITS VADFIAARYG KSQTLAALVT
LIALFGIMPY IALQLKAMVF SLNLFQPADD PLDGVTIPLL ITSLLAIFAI LFGTRKLDAT
EHNPGMMLAI AFESLVKLAA FLLVGVVISF GVFDGFGDIW QQANAQSLIN YPNPRIEALM
PELLVGMAAF LCMPRQFHVM VVECADESVL SKGRWLFPIY LALFGLFVGP LALAGKIILG
DSVSADTYVI NLPLALDQPL LAVIALLGTL SAATGMVIVA VVTISVMVSN EWLVPVMLRT
GHIREKNFSQ FSQLLLNARR LAIVIILGLG YGSYLALADS DSLSHLGMLS FGAFAQLAPA
LVGGLYWKHG NRAGVFLGLG VGFTLWFYIM LQGMTDVQSS SVFLSGVASE KGLLDAITPN
VRDALTALFA NIACYILGSI WFRAGVAERI QASAFVSPGK LKNSANKKNG PISQQDLLIL
ASRFVSPTRA YESFSRFSID AVKSDSWHKA APPELIFHTE RLLAGVLGAS SASLVMDSVL
QGRDLALDEV FSLVDEASSK IMLSQDMLRG AIEHAYEGMS VIDNDLNLVA WNYKYVELYQ
YPDGFLQQGM PISEVIRFNA ARGYCGEGEI EQQVEQRVQH MRNGTPHTSE RHRRDGKVIK
IQGNPMPDGG FVMTFTDITQ YREQERALLE ANETLESRVN ERTYELAMLN SELLEAKAQE
EIANASKSRF LAAVGHDLMQ PLNAARLFTA SLSQYPNLDR EARTTLSHVN SSLKIAGELL
TDLLDISKLD SGMVDVNRRD FAISELINGL SVEFEAMAAD NQIRFKMIPC SATVNSDPSL
LRRVLQNFLT NAYRYARGGR VLFGCRHRGH YLEIQVLDTG CGIDEKETQE IFKEFKRLNN
PKSNNVSGLG LGLAIADRIS KVLEHGIQVS SHLGRGSVFS ICVPLGETVR QPQVKALPSL
LQPLSGIKVL CIDNEEAILA GLESLLSRWQ CEVICAKDLS DARIKLGLKG VAPDIVLADY
HLDDGQNGVD AMDGIRALYG KDLPGILITA NTRKELVEDV QRRGYHYMAK MIKPAALRAL
ISSLVK