Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1749 |
Symbol | |
ID | 5371541 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2104748 |
End bp | 2108188 |
Gene Length | 3441 bp |
Protein Length | 1146 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829952 |
Product | integral membrane sensor hybrid histidine kinase |
Protein accession | YP_001365955 |
Protein GI | 153000274 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0591] Na+/proline symporter [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0353406 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATTTAA CCTTAGTCGT CGCCGTTATT GCCGTCTGTT ATGTCTCGCT TTTATTCCTA TTAGCGTGGG GGGCGGAGCG TTGGTTTAGC CGGATCACCA AAAAGCTACA GGTCGGTATT TATGGCCTGA GCTTAGCGGT CTACTGCTCT TCGTGGAGCT TTTTAGGCAC AGTTGGCCAA TCGGCTAAGG ATCTCTGGTC TTTTTTACCG ATTTTTATCG GCCCCATTCT GATTTTTACC TTAGGTTTTG GCATGTTACG CAAGATGGTA TTAGTGTCTA AGGCACAAAA TATCACCTCA GTGGCCGACT TTATTGCCGC CCGATACGGC AAATCCCAAA CCTTAGCCGC CTTAGTCACC TTAATCGCCT TGTTTGGCAT CATGCCCTAT ATCGCCCTGC AGCTTAAGGC GATGGTGTTC AGCCTTAACC TGTTTCAACC CGCCGACGAT CCCCTCGATG GCGTGACGAT TCCGTTACTG ATCACGTCTT TGTTAGCCAT ATTTGCCATT TTATTTGGTA CCCGCAAACT CGATGCCACC GAGCACAATC CCGGCATGAT GCTTGCGATT GCCTTTGAGT CTCTGGTGAA GCTCGCCGCA TTTTTATTGG TCGGCGTCGT CATTAGTTTT GGGGTGTTCG ATGGTTTTGG GGATATTTGG CAGCAGGCGA ATGCGCAGTC GCTGATCAAT TATCCCAATC CCCGTATCGA AGCTTTAATG CCTGAGTTAC TTGTCGGAAT GGCGGCGTTT TTGTGTATGC CAAGGCAGTT CCATGTGATG GTGGTGGAAT GCGCCGATGA GTCTGTGCTG TCGAAAGGAC GTTGGCTATT TCCTATCTAT TTAGCGCTTT TTGGTTTATT CGTTGGGCCA CTCGCCTTGG CGGGGAAAAT TATCCTCGGC GATTCTGTGT CGGCCGATAC CTATGTGATT AATCTACCAC TCGCCTTAGA CCAACCTTTG CTGGCGGTGA TTGCGCTGCT GGGCACACTT TCGGCGGCAA CCGGCATGGT GATAGTGGCG GTGGTGACTA TTAGTGTGAT GGTGAGTAAC GAATGGCTAG TGCCCGTGAT GCTGCGGACG GGCCATATCC GTGAGAAAAA CTTCAGCCAG TTCTCGCAGC TACTACTCAA TGCCCGCCGT TTGGCGATCG TGATCATTCT TGGCTTAGGT TATGGCAGTT ATCTGGCCTT AGCCGACAGT GATTCCTTAT CCCATCTCGG CATGTTGTCC TTCGGGGCTT TTGCTCAGTT AGCGCCTGCC TTAGTGGGCG GTCTCTATTG GAAACACGGC AATCGTGCTG GGGTGTTTTT AGGACTCGGC GTCGGCTTTA CGCTGTGGTT TTACATCATG TTGCAGGGCA TGACAGATGT GCAAAGTTCA TCGGTGTTCT TGTCTGGCGT CGCGAGCGAG AAAGGCCTGC TAGATGCGAT AACGCCCAAT GTGCGTGATG CGCTGACGGC ACTTTTTGCC AATATCGCCT GTTATATTTT GGGGTCGATT TGGTTTAGGG CGGGTGTGGC CGAGCGTATT CAGGCCAGTG CCTTTGTCAG TCCTGGCAAG TTGAAAAACA GCGCCAATAA GAAAAATGGC CCGATTTCAC AGCAGGATTT GCTTATTCTA GCCAGTCGAT TCGTCAGCCC AACGCGCGCC TATGAAAGCT TTAGCCGTTT CTCAATTGAC GCCGTAAAAA GTGATAGTTG GCATAAAGCG GCGCCGCCAG AGCTGATTTT CCACACGGAA CGTTTATTAG CGGGCGTACT CGGCGCCTCA AGCGCGTCGC TGGTGATGGA TTCTGTGCTG CAAGGGCGTG ATTTGGCGCT GGATGAAGTG TTCAGTCTAG TGGATGAAGC ATCATCCAAA ATTATGCTCA GCCAAGACAT GCTGCGCGGC GCGATTGAGC ACGCCTATGA AGGCATGAGC GTGATAGATA ACGATCTTAA CCTAGTAGCT TGGAATTATA AATATGTGGA GCTGTATCAA TATCCCGATG GATTCTTGCA GCAGGGTATG CCCATCAGCG AAGTGATCCG TTTTAATGCG GCGCGGGGTT ATTGTGGTGA AGGTGAAATC GAACAGCAGG TTGAACAGCG GGTGCAGCAC ATGCGTAATG GCACGCCGCA CACTTCTGAG CGCCATCGCA GGGACGGTAA AGTGATTAAA ATTCAAGGTA ATCCCATGCC AGACGGTGGC TTTGTGATGA CCTTTACCGA TATTACTCAG TATCGCGAGC AGGAGCGCGC GCTGCTCGAA GCCAATGAAA CCTTAGAAAG CCGCGTTAAC GAACGTACCT ACGAATTAGC CATGTTGAAC AGTGAGTTAC TCGAGGCTAA AGCGCAGGAA GAAATCGCCA ACGCCTCTAA GAGTCGCTTC TTGGCCGCCG TTGGCCATGA CTTAATGCAG CCACTAAATG CCGCGCGGCT GTTTACCGCA TCTTTATCTC AGTATCCCAA TTTAGATCGC GAGGCCAGAA CCACCTTATC CCATGTGAAT AGCTCGCTTA AGATAGCCGG CGAGTTGCTC ACCGATCTGC TGGATATCTC TAAACTCGAT TCTGGCATGG TTGATGTCAA TCGGCGTGAC TTTGCGATTT CAGAACTGAT CAATGGCTTA TCCGTGGAGT TTGAAGCGAT GGCAGCGGAC AACCAAATCC GTTTTAAGAT GATCCCATGC AGCGCGACCG TTAATTCCGA TCCTTCGCTG TTACGGCGTG TCCTACAAAA CTTTTTAACC AATGCCTACC GTTACGCCCG TGGCGGCAGA GTCTTGTTTG GTTGTCGCCA TCGCGGTCAT TATCTTGAGA TCCAAGTATT AGACACGGGC TGTGGTATCG ATGAAAAGGA AACCCAAGAA ATTTTTAAAG AATTCAAACG GCTGAATAAT CCTAAGAGCA ATAATGTCAG CGGCTTGGGC TTAGGTTTAG CGATTGCCGA TCGTATCAGT AAAGTGTTAG AACACGGTAT TCAAGTCTCG TCCCATTTAG GGCGCGGCTC GGTATTCTCT ATTTGTGTGC CGCTCGGGGA GACTGTACGC CAGCCACAAG TGAAGGCGTT GCCATCGCTG TTGCAACCAT TATCGGGTAT CAAAGTGTTG TGTATCGATA ACGAAGAGGC GATTCTGGCT GGCTTAGAAA GTCTATTAAG TCGTTGGCAA TGTGAGGTTA TTTGCGCCAA AGATTTATCC GATGCACGCA TTAAGCTGGG GCTGAAAGGC GTCGCGCCCG ATATTGTCCT CGCCGATTAT CACTTAGATG ATGGCCAAAA TGGCGTCGAT GCGATGGACG GTATTCGTGC CCTGTATGGC AAAGACTTGC CCGGCATTTT GATCACCGCC AATACCCGTA AAGAGCTGGT GGAAGATGTG CAACGCCGCG GCTATCACTA TATGGCGAAA ATGATAAAAC CTGCCGCGCT GCGCGCCTTG ATTTCTAGCT TAGTGAAATG A
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Protein sequence | MNLTLVVAVI AVCYVSLLFL LAWGAERWFS RITKKLQVGI YGLSLAVYCS SWSFLGTVGQ SAKDLWSFLP IFIGPILIFT LGFGMLRKMV LVSKAQNITS VADFIAARYG KSQTLAALVT LIALFGIMPY IALQLKAMVF SLNLFQPADD PLDGVTIPLL ITSLLAIFAI LFGTRKLDAT EHNPGMMLAI AFESLVKLAA FLLVGVVISF GVFDGFGDIW QQANAQSLIN YPNPRIEALM PELLVGMAAF LCMPRQFHVM VVECADESVL SKGRWLFPIY LALFGLFVGP LALAGKIILG DSVSADTYVI NLPLALDQPL LAVIALLGTL SAATGMVIVA VVTISVMVSN EWLVPVMLRT GHIREKNFSQ FSQLLLNARR LAIVIILGLG YGSYLALADS DSLSHLGMLS FGAFAQLAPA LVGGLYWKHG NRAGVFLGLG VGFTLWFYIM LQGMTDVQSS SVFLSGVASE KGLLDAITPN VRDALTALFA NIACYILGSI WFRAGVAERI QASAFVSPGK LKNSANKKNG PISQQDLLIL ASRFVSPTRA YESFSRFSID AVKSDSWHKA APPELIFHTE RLLAGVLGAS SASLVMDSVL QGRDLALDEV FSLVDEASSK IMLSQDMLRG AIEHAYEGMS VIDNDLNLVA WNYKYVELYQ YPDGFLQQGM PISEVIRFNA ARGYCGEGEI EQQVEQRVQH MRNGTPHTSE RHRRDGKVIK IQGNPMPDGG FVMTFTDITQ YREQERALLE ANETLESRVN ERTYELAMLN SELLEAKAQE EIANASKSRF LAAVGHDLMQ PLNAARLFTA SLSQYPNLDR EARTTLSHVN SSLKIAGELL TDLLDISKLD SGMVDVNRRD FAISELINGL SVEFEAMAAD NQIRFKMIPC SATVNSDPSL LRRVLQNFLT NAYRYARGGR VLFGCRHRGH YLEIQVLDTG CGIDEKETQE IFKEFKRLNN PKSNNVSGLG LGLAIADRIS KVLEHGIQVS SHLGRGSVFS ICVPLGETVR QPQVKALPSL LQPLSGIKVL CIDNEEAILA GLESLLSRWQ CEVICAKDLS DARIKLGLKG VAPDIVLADY HLDDGQNGVD AMDGIRALYG KDLPGILITA NTRKELVEDV QRRGYHYMAK MIKPAALRAL ISSLVK
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