Gene Shew185_1743 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1743 
Symbol 
ID5372294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2096416 
End bp2096952 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content46% 
IMG OID640829939 
Productpeptidoglycan-associated lipoprotein 
Protein accessionYP_001365949 
Protein GI153000268 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.04821e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATCTGA ATAAGTTGTT AAAAGCTATG TTGGTAGCAC TTCCAATTAT GGCTCTTAGT 
GCATGTAGCT CAACTTCAGA ATCAGAAACT GATGCAATGG GCTCAACAAA CGGTTCAGGT
AGTGAGCTGA ATGGTGGTGG CATTCAAACT GGTGGTGTAG GCGCAATGTT GTCTGCTGAA
GAGCAACAAC GCCAGCAGTT AGAAGACTTG AGAAAGCAAC ACATCATTTA CTTCGACTTT
GACCGCAGTG AAGTTCAAAC TGATTTCGCC GCAATATTAG AAGCCCATGG CACTTACTTA
GTTGAGCACC CAAGCGTGCG CGTTCTGATT GAAGGCCATG CGGATGAGCG CGGCACGCCT
GAGTACAACA TCGCCCTGGG TGAACGTCGT GCTAAAGCCG TTGCTAAATA CCTACAAGGT
ATGGGCGTAC AGCCAAGCCA AATGAGCGTA GTCAGCTATG GCGAAGAAAA ACCACTTGAT
TTTTCTCGCA CTGATGAAGG TTTTGGCAAA AACCGTCGTG CAGTTTTAGT TTACTAA
 
Protein sequence
MDLNKLLKAM LVALPIMALS ACSSTSESET DAMGSTNGSG SELNGGGIQT GGVGAMLSAE 
EQQRQQLEDL RKQHIIYFDF DRSEVQTDFA AILEAHGTYL VEHPSVRVLI EGHADERGTP
EYNIALGERR AKAVAKYLQG MGVQPSQMSV VSYGEEKPLD FSRTDEGFGK NRRAVLVY