Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1740 |
Symbol | |
ID | 5369855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2093570 |
End bp | 2094004 |
Gene Length | 435 bp |
Protein Length | 144 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829936 |
Product | biopolymer transport TolR |
Protein accession | YP_001365946 |
Protein GI | 153000265 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000000388711 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCAG CTTATCAGCG CAAACGTCGT CGCCCCGTTG CCGAAATCAA CGTGGTGCCC TATATCGACG TGATGCTCGT GCTGTTAATT ATTTTTATGG TAACAGCGCC CATAGTCACC CAAGGAGTAA AAGTGGAGCT GCCTCAAGGG GCTGCGGAAG TTTTACCTGC TGACAGTAAG CCACCTGTGG TGGCTTCGAT TGACGGTGAT GGTGATTATT ATCTGAATAA AGGCGGTTCA ACTAACGTTC CTATGGACTT GGAAGAACTG GCGACGGAAG TTGCTGCGCT TATGGTGACA GAGCCTGAGC GTCCAGTGGT GGTTAAGGCC GATAGAAATA TTCCTTACGA TAAAGTGATT CAGTTGATGG TGACCTTGCA AGGTGCTGGC GTGCCATCAG TCGGTTTGAT GACGGATTCA CCCAAGGAGA AATAG
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Protein sequence | MQPAYQRKRR RPVAEINVVP YIDVMLVLLI IFMVTAPIVT QGVKVELPQG AAEVLPADSK PPVVASIDGD GDYYLNKGGS TNVPMDLEEL ATEVAALMVT EPERPVVVKA DRNIPYDKVI QLMVTLQGAG VPSVGLMTDS PKEK
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