Gene Shew185_1728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1728 
Symbol 
ID5369685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2079833 
End bp2080579 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content49% 
IMG OID640829924 
ProductUMP phosphatase 
Protein accessionYP_001365934 
Protein GI153000253 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0647] Predicted sugar phosphatases of the HAD superfamily 
TIGRFAM ID[TIGR01460] Haloacid Dehalogenase Superfamily Class (subfamily) IIA 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.38596e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAATA TTATCTGCGA TATCGATGGT GTACTACTGC ACGACAATAA ACTGATCCCT 
GGCAGCGACA AATTTATCCA GCGTATTTTA GAACAAGGCA ATCCGTTAGT CGTCCTGACT
AACTATCCCG TACAAACGGG AAAGGATCTG CAAAACCGTT TAAGCGCTGC CGGTATTGAT
ATTCCTGAAG AATGCTTTTA TACCTCCGCG ATGGCAACCG CTGACTTTTT ACAGCACCAA
GAAGGCAGCA AAGCCTATGT CATTGGTGAA GGCGCCCTCA CCCACGAACT CTACAAAGCA
GGCTTTACCA TTACCGATAT CAACCCTGAC TTTGTGATTG TCGGTGAAAC CCGCTCCTAC
AATTGGGAAA TGATCCATAA AGCCGCAGCT TTTGTGGCAG GTGGCGCCCG CTTTATTGCC
ACCAACCCTG ACACTCACGG CCCAGCTTAC AGCCCTGCCT GTGGCGCCCT ATGTTCGCCA
ATCGAGCGTA TTACCGGTAA AAAACCTTTC TACGTGGGTA AACCGAGTGC TTGGATTATT
CGCTCAGCGC TAAATCATAT TGATGGGCAC TCGGAAGACA CTGTCATTAT CGGCGACAAT
ATGCGCACCG ATATTTTGGC AGGCTTCCAA GCGGGGCTTG AAACCATTCT GGTCACCAGT
GGCGTGAGTA AACTTGAAGA TATCGACAAA GAACCCTTCC GCCCGAACCA TGTGTTTGCC
TGCGCTGGCG ACATCGATGT TGTTTAA
 
Protein sequence
MKNIICDIDG VLLHDNKLIP GSDKFIQRIL EQGNPLVVLT NYPVQTGKDL QNRLSAAGID 
IPEECFYTSA MATADFLQHQ EGSKAYVIGE GALTHELYKA GFTITDINPD FVIVGETRSY
NWEMIHKAAA FVAGGARFIA TNPDTHGPAY SPACGALCSP IERITGKKPF YVGKPSAWII
RSALNHIDGH SEDTVIIGDN MRTDILAGFQ AGLETILVTS GVSKLEDIDK EPFRPNHVFA
CAGDIDVV