Gene Shew185_1716 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1716 
Symbol 
ID5373132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2063400 
End bp2064146 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content46% 
IMG OID640829912 
Product3-oxoacyl-(acyl-carrier-protein) reductase 
Protein accessionYP_001365922 
Protein GI153000241 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID[TIGR01830] 3-oxoacyl-(acyl-carrier-protein) reductase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.69264e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTCA ACCTGAATTT AACAGGCAAA GTGGCTTTGG TGACTGGTGC GAGCCGCGGT 
ATTGGCCGTG CGATCGCTGA GACACTGGTC GAAGCCGGTG CCGTTGTTAT TGGAACCGCA
ACCAGTGAGA AGGGCGCTGC GGCGATCCAA GAATATCTGG GTGACAAAGG TTTTGGTTTA
GTGCTTAATG TCACAGATAG TGAATCTGTT ACACATTTAT TCGCCTCGAT CAAAGAAAAA
GCCGGTGATG TTGATATTCT AGTCAACAAC GCGGGTATAA CCCGTGATAA TCTGCTGATG
CGGATGAAAG ATGATGAATG GCAGGATATT ATCGACACTA ACCTGACATC GTTATTTAGA
CTATCAAAAC CTGTGATGCG TACCATGATG AAAAAGCGCT TTGGCCGAAT CATCAATATC
GGTTCAGTGG TAGGTACCAT GGGTAATGCA GGTCAAGTTA ACTACTCGGC AGCAAAGGCG
GGTTTGATTG GATTTACAAA ATCTCTTGCA AGAGAGGTTG CATCTCGTCA AATTACAGTT
AATGCTATCG CTCCTGGATT TATCCAGACC GATATGACAG ATGAGCTGAC CGAAGAGCAG
CAAAAAGCTA TCATGTCACA GGTTCCGATG GAACGATTAG GGCAAGCGCA AGAAATTGCG
AACGCAGTGC TCTTCTTGGC CTCGGACTCA GCCGCTTACA TCACAGGCGA AACTTTGCAT
GTGAATGGCG GCATGTACAT GGTTTAA
 
Protein sequence
MSFNLNLTGK VALVTGASRG IGRAIAETLV EAGAVVIGTA TSEKGAAAIQ EYLGDKGFGL 
VLNVTDSESV THLFASIKEK AGDVDILVNN AGITRDNLLM RMKDDEWQDI IDTNLTSLFR
LSKPVMRTMM KKRFGRIINI GSVVGTMGNA GQVNYSAAKA GLIGFTKSLA REVASRQITV
NAIAPGFIQT DMTDELTEEQ QKAIMSQVPM ERLGQAQEIA NAVLFLASDS AAYITGETLH
VNGGMYMV