Gene Shew185_1712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1712 
SymbolrpmF 
ID5372229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2060218 
End bp2060388 
Gene Length171 bp 
Protein Length56 aa 
Translation table11 
GC content47% 
IMG OID640829908 
Product50S ribosomal protein L32 
Protein accessionYP_001365918 
Protein GI153000237 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0333] Ribosomal protein L32 
TIGRFAM ID[TIGR01031] ribosomal protein L32 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.29996e-11 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTAC AACAGAACAA AAAATCACGT TCAAAGCGCG GAATGCGCCG TTCACATGAC 
GCACTGAGCA CTGCTCAGCT GTCTGTAGAC GCTACCAGCG GTGAAATCCA TATGCGTCAC
AATGTGACTG CAGATGGCTT CTATCGCGGT AAAAAGGTAA TCAACAAGTA A
 
Protein sequence
MAVQQNKKSR SKRGMRRSHD ALSTAQLSVD ATSGEIHMRH NVTADGFYRG KKVINK