| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1707 |
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| Symbol | |
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| ID | 5372235 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | - |
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| Start bp | 2052944 |
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| End bp | 2056390 |
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| Gene Length | 3447 bp |
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| Protein Length | 1148 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829903 |
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| Product | ribonuclease |
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| Protein accession | YP_001365913 |
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| Protein GI | 153000232 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000116835 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGCGAA GCGCGATGTT TGATGACCTC TATTTAAAGA AGAATGACGT CATCATGAAA
CGTATGTTAA TCAATGCAAC TCAATCAGAA GAGTTGCGTG TTGCCCTTGT TGATGGGCAA
CAACTGTATG ATCTAGATAT TGAAAGTCCA GGTCATGAGC AAAAAAAATC AAACATTTAC
AAAGGTAAAA TTACCCGCGT AGAACCGTCT TTAGAAGCCG CTTTCGTCGA CTACGGTGCC
GATCGTCACG GCTTTTTGCC ACTGAAAGAA ATCGCCAGAG AATATTTCCC GAAAGGATAT
TCGTTCCAAG GTCGCCCAAA TATCAAAGAA GTGGTCAGTG AAGGACAAGA AGTTATTGTC
CAAATTGACA AAGAAGAACG CGGCAATAAA GGCGCAGCCT TAACGACCTT CATCAGCCTT
GCAGGCTCTT ACTTAGTATT AATGCCAAAC AACCCACGTG CAGGCGGGAT TTCTCGTCGT
ATCGAAGGTG ATGAGCGTAC TGAGTTAAAA GAAGCGATGG CCGATTTGGA AGTGCCAGCG
GGCATGGGTC TTATCGTACG TACTGCCGGT GTGGGTAAAG AATCTGCCGA GTTAAAGTGG
GACTTAAAAG TTCTGCAGCA CCACTGGGCA GCAATCACCG AAGCTTCACA GGTTAAAGGC
GCTCCTTTCT TAATTCACCA AGAAAGTAAC GTGATCGTGC GCGCTATTCG TGACTACTTA
CGTCGTGATG TGGGCGAGAT CCTTATCGAC CATCCACGTA TTTTCGAAGA AGCTAAGCAA
CATATCGCCT TAGTTCGCCC TGATTTCGTT GAGCGCGTAA AACTTTACGA AGCCGAAGTG
CCGTTATTCA CTCACTTCCA AATCGAATCA CAAATCGAAT CTGCCTTCCA ACGTGAAGTG
CGTCTGCCAT CTGGCGGTTC GATTGTTATC GACCCAACTG AAGCTTTAAC CTCAATCGAT
ATCAACTCTG CCCGTGCCAC TAAAGGCGGC GATATTGAAG AGACAGCACT GAACACTAAC
CTTGAAGCCG CCGATGAAAT TGCCCGTCAA TTACGTCTGC GTGACTTAGG TGGCTTAGTG
GTTATCGACT TTATCGATAT GACGCCTGTG CGCCATCAGC GTGAAGTTGA AAACCGCTTA
CGTGATGCTG TGCACCATGA CCGCGCTCGC GTGCAGTTAG GTCGCATCTC GCGTTTTGGT
TTGATGGAAA TGTCGCGTCA GCGTCTGCGT CCTTCTTTAG AAGAATCTGC TGCGCATATC
TGCCCTCGCT GTCATGGCCA AGGCACGATT CGCAGTACTG AATCTTTAGC ACTGTCGATT
TTACGTTTGA TGGAAGAAGA AGCCATCAAA GAGAACACCT CACAAATCGA AGCAATTGTG
CCTGTGGATG TGGCGGCTTT CTTGTTAAAC GAGAAACGCA AAGCCATTCG CATCACAGAG
CAACGTCACG ATGTCGAAGT ATATGTGATA CCTGATGCGC ACATGATGAC GCCAGATTAT
CGCGTGATCC GTCACCGTAG TGATGATGAA ATCAGCGAAT CGAGCTATAA GCGTATCGAA
CAGCCTGAAG CTAAATTGTA TGAGCCACGT AAACTGGAAC GTACCGCAGC GCCTATTCCG
GCATTAAAAG GGTTTGCCGC GCCACAGAAA GTGGAACAAG CCCCATCACC AACGGTGAAA
GTTGAAGCGC CACAACCAGG TTTCTTCAGC AAGCTTGTGA GTGCAATCAG TGCTATGTTT
GCACCAAGCG AAAAAGCAGA ACCCGTAAAA GTTGTTGAAA CTAAAACAAC CGATACCAGT
GCAGCTAACG CTAACCGCCG TAACCGTCGC AACGATACTC GCCGCCCACG TAATGCCCAA
GATGCCGACA AAGCAAAAGA AGGCACTCGT GAGCCACGCA GCCGTAATTC GAAAAAACCG
GCCGATGCAG CGGTAAATAC AAGCGCTCAA GAACGTCCTG TTCGTGAGAA AGAAGAAACT
AAACGTCCAG CGCGATCCGA ACCTAAGCCA CGTGTACAAG CACCAAAAGA CGTGGTTGCT
GACGTAGAAG CCGATGCACC TAAGCAAGAA GTCGCCCGTG AACGTCGTCA ACGTCGTAAC
ATGCGCCGTA AGGTGCGTAT CGATAATGGC CATAACACGC CAGATAATGC TATTCCAATT
GCACCAGAAG ATGCCGCTGA AGTATTAGCT GAGATTGCTG CCGTTAACGC CGCGGCGGCG
AGCACTATCA GTGTTGACAC TAAAACTGAA GTTGTCCAAG CACCAACTGA AACAAAAGCA
CCAAGAACAC GTCGTCAGCC TCGTAAAGAA GCGGCACCTG CTCAAGAAGC TGCTGAAAAT
GTTGCGGTAG AAGAGAAAGC GGTGAGCTCT GCAGTAACTG AAACCCCAGC GGTTGATGCT
GTTAAGACTG AAGAACAGGC TGAAGTGGTT ACAGCTGATG TTACAGCACC TATGGATGCG
ATATCGCAAG ATAACGACGC AATTGATACT GAAAGCGAAA CTGCTGATGA TCAAGCAAAA
CGCGAGCAAA GAGATGGTCA ACGTCGTAGC CGTCGAAGCC CGCGTCACCT TCGTGCAGCG
GGTCAACGCC GTCGTCGCGA CGAAGATGAC CAAGGTACAT CAACGCCAGC GCAATTCATC
CCTAACGATG AATTGGGTGC TAACCAAGAG TATCCAAGCG AAGTCGCCAG TGTCCGTGTA
GAAGCGCCAG TCGTCGCAAC TAAAACAGAT GCCGTGACTG AAACTCAAGT AACTGCTAAA
TCCGTTGAAG TAGATATGGC ACAAGCAAGC GAAGCACCTG TTGTTGAAGC TCCTGCAGTC
GTTAAAGCTG AAACGAAAGT TGAAACGTCA GCAAATGACG TTACAGCAGT CGAAACTCAA
GAAGTTGAAA CTAAGCCAGT TGAGACTAAA GCCACTGAAG CGGATGCGCC AAAAACGGTT
GAAGTGAAAA TTGACGTTGC ACCAGTCGTT GAAGCTCCAG TAGCCAGCGT TGCAGTAGAA
ACCGAAGTGG GTAACGCCCC TGTAGTTGAA AGCCCAGCGG TTACACCAGC TGCGCCAAAA
GTTGAAGCGG CTAAAGTTGA AGTGGCTAAG ACTGAAACTG CTGTAGAGCC AAGCGTTGCA
CCAAGTGTTG AAGTTAAAGA AGCGATTAAA GCTGCAGCCT CTGCTCCAAT GGCAAAACCT
GCTGCTATCG CTAAGCCTCA AGCAACAGTG CAAGTGGCCC CAACGACAGT GAATCCGCAA
ATCACTGACG CCCTTGTAGT CAACAAGCCG AAAGCCGCAA GCCGTTTTGG TTCTATGGTG
TCTTCGGATA TGACCAAGCC TGTAGTTGAA GTGAGAGAGC AAGTGGCAGT GCCTAAAGGA
CGCGAGTATG AGAATACTGC AACCGAAGAG CCTACCGCCA AAATTAAACT CACTAACGGT
GCTGAGTCGG ATATGGCTCG TCCATAA
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| Protein sequence | MQRSAMFDDL YLKKNDVIMK RMLINATQSE ELRVALVDGQ QLYDLDIESP GHEQKKSNIY
KGKITRVEPS LEAAFVDYGA DRHGFLPLKE IAREYFPKGY SFQGRPNIKE VVSEGQEVIV
QIDKEERGNK GAALTTFISL AGSYLVLMPN NPRAGGISRR IEGDERTELK EAMADLEVPA
GMGLIVRTAG VGKESAELKW DLKVLQHHWA AITEASQVKG APFLIHQESN VIVRAIRDYL
RRDVGEILID HPRIFEEAKQ HIALVRPDFV ERVKLYEAEV PLFTHFQIES QIESAFQREV
RLPSGGSIVI DPTEALTSID INSARATKGG DIEETALNTN LEAADEIARQ LRLRDLGGLV
VIDFIDMTPV RHQREVENRL RDAVHHDRAR VQLGRISRFG LMEMSRQRLR PSLEESAAHI
CPRCHGQGTI RSTESLALSI LRLMEEEAIK ENTSQIEAIV PVDVAAFLLN EKRKAIRITE
QRHDVEVYVI PDAHMMTPDY RVIRHRSDDE ISESSYKRIE QPEAKLYEPR KLERTAAPIP
ALKGFAAPQK VEQAPSPTVK VEAPQPGFFS KLVSAISAMF APSEKAEPVK VVETKTTDTS
AANANRRNRR NDTRRPRNAQ DADKAKEGTR EPRSRNSKKP ADAAVNTSAQ ERPVREKEET
KRPARSEPKP RVQAPKDVVA DVEADAPKQE VARERRQRRN MRRKVRIDNG HNTPDNAIPI
APEDAAEVLA EIAAVNAAAA STISVDTKTE VVQAPTETKA PRTRRQPRKE AAPAQEAAEN
VAVEEKAVSS AVTETPAVDA VKTEEQAEVV TADVTAPMDA ISQDNDAIDT ESETADDQAK
REQRDGQRRS RRSPRHLRAA GQRRRRDEDD QGTSTPAQFI PNDELGANQE YPSEVASVRV
EAPVVATKTD AVTETQVTAK SVEVDMAQAS EAPVVEAPAV VKAETKVETS ANDVTAVETQ
EVETKPVETK ATEADAPKTV EVKIDVAPVV EAPVASVAVE TEVGNAPVVE SPAVTPAAPK
VEAAKVEVAK TETAVEPSVA PSVEVKEAIK AAASAPMAKP AAIAKPQATV QVAPTTVNPQ
ITDALVVNKP KAASRFGSMV SSDMTKPVVE VREQVAVPKG REYENTATEE PTAKIKLTNG
AESDMARP
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