Gene Shew185_1676 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1676 
Symbol 
ID5372398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2025052 
End bp2025792 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content44% 
IMG OID640829874 
Producthypothetical protein 
Protein accessionYP_001365884 
Protein GI153000203 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0089383 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATCTTA TCGATGCCAC CTTAGGGGAT ACGAGATTGA ATAAGAGTTT AGTAACAAAT 
TTATTGGCGG CTGCTTTGGT GGTTGTCGGT TACCTGATGC ATTCGGCAAT TGTCCTGAAT
GTCGGATTGT TTGCCTTATC GGGTGCGATT ACCAATTGGG TTGCGGTTTA TATGTTGTTT
GAGAAAGTCC CCGGACTCTA TGGCTCGGGA GTCGTGCCTT CTCGTTTTGA AGAGTTTAAG
GCGGGCATTG CTCATCTGAT GATGAAGCAG TTTTTTACTA CAGAAAATAT CGAACGATTC
CTATCGGAAA AAGAAGGCAT CAGTAAAATG GATTTGGCGC CCGTGATTGA AAAGGTCGAT
TTAGCGCCTT CTTTCGATGC CTTAATTAGC ACAGTCGCGC AATCTTCCTT TGGAGGCATG
TTGTCTATGT TCGGCGGTAC AGATGCGTTA TTACCGCTAA AAGAGCCGTT TATTGTGAAG
ATGAAAGCTT CTTTAGTTGA AATGGCGCAA AGTGATGCAT TCCACGAGCT GTTGAAACAA
GAAATCGAAC AGCCAAATGT GATGGCCGAT CTGCAAACTA AAATTGCCAA TATAGTGGAA
CAAAGGTTAA ACGAGCTGAC ACCGCAAATG GTGAAACAAA TCGTTCAGGA CATGATCCAA
ACGCATTTAG GTTGGTTAGT GATCTGGGGC GGGGTGTTTG GTGGTCTGAT TGGACTTGTC
GCAGCCTTAA TCCAAGGTTA A
 
Protein sequence
MHLIDATLGD TRLNKSLVTN LLAAALVVVG YLMHSAIVLN VGLFALSGAI TNWVAVYMLF 
EKVPGLYGSG VVPSRFEEFK AGIAHLMMKQ FFTTENIERF LSEKEGISKM DLAPVIEKVD
LAPSFDALIS TVAQSSFGGM LSMFGGTDAL LPLKEPFIVK MKASLVEMAQ SDAFHELLKQ
EIEQPNVMAD LQTKIANIVE QRLNELTPQM VKQIVQDMIQ THLGWLVIWG GVFGGLIGLV
AALIQG