Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1676 |
Symbol | |
ID | 5372398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 2025052 |
End bp | 2025792 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 640829874 |
Product | hypothetical protein |
Protein accession | YP_001365884 |
Protein GI | 153000203 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0089383 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCATCTTA TCGATGCCAC CTTAGGGGAT ACGAGATTGA ATAAGAGTTT AGTAACAAAT TTATTGGCGG CTGCTTTGGT GGTTGTCGGT TACCTGATGC ATTCGGCAAT TGTCCTGAAT GTCGGATTGT TTGCCTTATC GGGTGCGATT ACCAATTGGG TTGCGGTTTA TATGTTGTTT GAGAAAGTCC CCGGACTCTA TGGCTCGGGA GTCGTGCCTT CTCGTTTTGA AGAGTTTAAG GCGGGCATTG CTCATCTGAT GATGAAGCAG TTTTTTACTA CAGAAAATAT CGAACGATTC CTATCGGAAA AAGAAGGCAT CAGTAAAATG GATTTGGCGC CCGTGATTGA AAAGGTCGAT TTAGCGCCTT CTTTCGATGC CTTAATTAGC ACAGTCGCGC AATCTTCCTT TGGAGGCATG TTGTCTATGT TCGGCGGTAC AGATGCGTTA TTACCGCTAA AAGAGCCGTT TATTGTGAAG ATGAAAGCTT CTTTAGTTGA AATGGCGCAA AGTGATGCAT TCCACGAGCT GTTGAAACAA GAAATCGAAC AGCCAAATGT GATGGCCGAT CTGCAAACTA AAATTGCCAA TATAGTGGAA CAAAGGTTAA ACGAGCTGAC ACCGCAAATG GTGAAACAAA TCGTTCAGGA CATGATCCAA ACGCATTTAG GTTGGTTAGT GATCTGGGGC GGGGTGTTTG GTGGTCTGAT TGGACTTGTC GCAGCCTTAA TCCAAGGTTA A
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Protein sequence | MHLIDATLGD TRLNKSLVTN LLAAALVVVG YLMHSAIVLN VGLFALSGAI TNWVAVYMLF EKVPGLYGSG VVPSRFEEFK AGIAHLMMKQ FFTTENIERF LSEKEGISKM DLAPVIEKVD LAPSFDALIS TVAQSSFGGM LSMFGGTDAL LPLKEPFIVK MKASLVEMAQ SDAFHELLKQ EIEQPNVMAD LQTKIANIVE QRLNELTPQM VKQIVQDMIQ THLGWLVIWG GVFGGLIGLV AALIQG
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