Gene Shew185_1659 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1659 
Symbol 
ID5373305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp2006283 
End bp2007980 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content45% 
IMG OID640829857 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_001365867 
Protein GI153000186 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.13246e-07 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTGA TCCTATTATT GACCCAACAG ATGTCGCTTT ACTTAGTGAT CGTTTACTTA 
GTCAGTAAAA CGCCGCTGTT TAAACTGTTT GCCGAAACCT CCCCGCGTCT GCCACATAAG
ATTTTTATGT ATCTGATTTT TTCAAGTTTC TGCATCATGG CCACCTATTT TGGTGAGCAA
ACATCAGGCG CGATTGCCAA CACCCGTGCT ATGGGCGCTG TCTTAGGTGG ATTACTAGGC
GGACCGATTA CCGGTTTTCT AGTTGGACTG ACTGGCGGAC TGCATCGCTA CAGTATGGGC
GGCTTTACTG AAATAGCCTG CGCCATTTCC ACCACCTTAG AAGGCTTATC CGCTGGGATG
ATAAGCTTCT ACTTAAGACG TGCGGGTAAA AGTGAGCTTA TCTACAATCC ATTACTCGTT
TGCCTAGTGA CTTTTTATGC CGAAATGATG CAAATGAGCA TCATCTTACT GGTCGCCCGC
CCCTTCGATG ATGCGTGGGA GTTAGTGCGT CAAATCGCGC CGCCCATGTT GTTAGTCAAT
TCCGTGGGAG CGGCACTCTT TATGAGCATG ATCCGCGACC AAAAAACTAT GTTCGATAAA
CTTTCCTCCA GTTTTTCAAC TAAAGCATTA AAGATAGCCG AACGCAGTGT CGGACTCCTA
TCCAAAGGAT TTAACGAAGA AAGCAGCAGC CGTGTCGCCA AAATCGTCAT AGAAGAAACC
AATGTAGGCG CAGTAGCCAT CACTGACAGG GAAAAACTGT TGGCTTTTAT TGGCATAGGT
GCCGATCATC ATCTGCCTGG TACGCCAATT TCTTCCAAGA TCACCTTAGA GGCGATCAAT
CAAAATAAAG TCATGTTCGC CGATGGCGTT GAAATGCCCT ATTCATGTTC TATTTCAAGC
AACTGCCGCT TAGGGTCGAG TCTTGTGATC CCGCTGCGCA GTGATACCGA AGTCATTGGT
ACCATCAAAC TCTACGAGCC GAAAAATAAA CTTTTTTTGA ATATTAACCG CACCTTAGGT
GAAGGTATTG CCCGTCTGTT ATCAAACCAA ATTCTTTATG GCCGGTTTGA GCAACAACAA
AATCTGCTGA CTCAAGCCGA ATTAAAATTA CTGCAAGCGC AGGTTAATCC ACACTTTCTG
TTCAATGCTC TCAATACCAT TAGCGCGATT ATCAAGCGCG ATCCCGATAT GTCTAAGCAA
TTGCTGCAGC AGTTATCTCA ATTTTTACGG ATTAATTTGA AGCGAACGAC AGGCTTAGTG
ACGCTTGGGG ATGAGCTAGA TCACATCGCG TCCTATCTCA CCATTGAAAA AGCGCGTTTT
ATTGATAAAT TACAAGTCAG TATCGCGATA CCTGAATCAC TCTACCACTG CAAAGTACCG
GCCTTTACCC TGCAGCCGAT TATTGAGAAT GCGGTAAAGC ACGGCACTTC GCACATGATA
GAGCAAGGGC AGATCAAAGT GACGGGCAAG CTCGAAAATG ATGTGCTGGA ATTAGAAGTC
ACAGACAATG CCGGATTATA TCAGCCCGTT GAGGGCTCTG AAGGCCTAGG GATGAACTTA
GTGCATAAAC GCATTCAAAA TATTTTTGGC GAGCAATATG GTGTCACTGT GGAATGCGAA
GCCGATGAAT TGACTCGTGT CACCATAAGA TTACCCATAG AAAACCCTGA GATATCCAAT
ATGGACACCC GCACGTGA
 
Protein sequence
MSLILLLTQQ MSLYLVIVYL VSKTPLFKLF AETSPRLPHK IFMYLIFSSF CIMATYFGEQ 
TSGAIANTRA MGAVLGGLLG GPITGFLVGL TGGLHRYSMG GFTEIACAIS TTLEGLSAGM
ISFYLRRAGK SELIYNPLLV CLVTFYAEMM QMSIILLVAR PFDDAWELVR QIAPPMLLVN
SVGAALFMSM IRDQKTMFDK LSSSFSTKAL KIAERSVGLL SKGFNEESSS RVAKIVIEET
NVGAVAITDR EKLLAFIGIG ADHHLPGTPI SSKITLEAIN QNKVMFADGV EMPYSCSISS
NCRLGSSLVI PLRSDTEVIG TIKLYEPKNK LFLNINRTLG EGIARLLSNQ ILYGRFEQQQ
NLLTQAELKL LQAQVNPHFL FNALNTISAI IKRDPDMSKQ LLQQLSQFLR INLKRTTGLV
TLGDELDHIA SYLTIEKARF IDKLQVSIAI PESLYHCKVP AFTLQPIIEN AVKHGTSHMI
EQGQIKVTGK LENDVLELEV TDNAGLYQPV EGSEGLGMNL VHKRIQNIFG EQYGVTVECE
ADELTRVTIR LPIENPEISN MDTRT