Gene Shew185_1641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1641 
Symbol 
ID5371025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1988593 
End bp1989894 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content42% 
IMG OID640829839 
Productpeptidase M23B 
Protein accessionYP_001365849 
Protein GI153000168 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.35092e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGACAG GCAAACCCAA CTTTATCAAC TTATCGCAAA CCCGTTTGCA GAACTTATCA 
TCGACCCAAA AAAACATTCT ATTAATGGGT GGTTTGTTGA TTGGCGCTGC TATGTTAATG
CCGAATAATG GTCATGTTGT GCCAACTGCT CAGCGTATCC CTGTTGTCCT CGATATTGAA
AATATTCTCC CCCAAGTTTC TGAACCTGAA GTCCAAGATC AAGCAACCCT TATTAATAAC
GCTCCACAGT TTGAGCGAAT TATCGTTTCT GGTGATACCT TAAGTGGGTT ATTTTCGAAA
GCGGGTGTTG ATCAGCAGAC CATGTATAAG GTGTTAGAAG CTGATTTAAA TATTTTGGCA
CTTGATACCT TATTGCCTGG TAACAGAATG CAATTTTGGC TCGATAACGA AGGCCAATTA
CAGAAATTAG AACTTTATTT TAACGCCGCT CGCCAAGTGG TGTTTACACG TTATGAAGAC
GGCAGTTTTA ATGTTGAAGA AGTCAACGTT GAAGGCGTTT GGCAAAATCG TATTATATCT
GGCGATATTA AAGGCTCATT CTACGTCTCT GCACAAAAAA TGGGTTTAGC TGCGGCAGAC
ATTCAGCGGA TTGAAGATTT ACTCAAAGAA AAATTGAATT TCGCCCGTGA TTTACGCGTT
GGCGATAAAT TCTCTGTTTT GGTAAATGAT CAATATGTTG AAGGTGAAGC AACGGGCAGT
AGCCAAATTT TAGGCGTGAG TATTAAAACC GGTCGTTCTG AAATTAGTGC ATTTCAATAT
ACTGACGGCA GTTATTACGA TGCCAAGGGC CAGAGTTTAG TACGTGCGTT CCAGCGTTAT
CCATTAGCTA AACAACCCCG CATGAGTTCC CGTTTTAATC CATATCGTAA GCATCCTATT
ACTGGCCGTA TTTCACCCCA TAACGGAACC GACTTTTCAG TGCCTATCGG GACTAAAGTG
ATTGCTCCTG GTGATGGTGT TGTTAGTTTA GTGACTGACC ATCAGTTCGC TGGTAAGTAT
ATTGTGATTG ACCACGGTGG TAAGTACCGT ACCCGTTACC TGCATTTATC TAAGGCGCTT
GTGCGTAAAG GTCAGCGAGT GACTCGAGGC CAAGTGATTG CTTTATCAGG TAATACTGGT
CGCTCAACGG GTCCACACTT ACATTATGAA TTCCATATCA ATGGTAAACC TGTTGACCCG
TTAAAAGCGG ATATTCCTAT GTCTAGCAAG TTAGCGAATC AAGACTTACG CACATTTACC
AATATGGTGA AGAGTCGTGA AGCTATGATG AACCTTGGCT AA
 
Protein sequence
MQTGKPNFIN LSQTRLQNLS STQKNILLMG GLLIGAAMLM PNNGHVVPTA QRIPVVLDIE 
NILPQVSEPE VQDQATLINN APQFERIIVS GDTLSGLFSK AGVDQQTMYK VLEADLNILA
LDTLLPGNRM QFWLDNEGQL QKLELYFNAA RQVVFTRYED GSFNVEEVNV EGVWQNRIIS
GDIKGSFYVS AQKMGLAAAD IQRIEDLLKE KLNFARDLRV GDKFSVLVND QYVEGEATGS
SQILGVSIKT GRSEISAFQY TDGSYYDAKG QSLVRAFQRY PLAKQPRMSS RFNPYRKHPI
TGRISPHNGT DFSVPIGTKV IAPGDGVVSL VTDHQFAGKY IVIDHGGKYR TRYLHLSKAL
VRKGQRVTRG QVIALSGNTG RSTGPHLHYE FHINGKPVDP LKADIPMSSK LANQDLRTFT
NMVKSREAMM NLG