| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1640 |
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| Symbol | |
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| ID | 5369492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1985271 |
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| End bp | 1988327 |
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| Gene Length | 3057 bp |
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| Protein Length | 1018 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829838 |
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| Product | SMC domain-containing protein |
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| Protein accession | YP_001365848 |
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| Protein GI | 153000167 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC
[TIGR03185] DNA sulfur modification protein DndD |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0173468 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGACCCC TTAGCCTTTC AATGTCAGCC TTTGGTCCCT TTGCATCGAC TCAGACACTT
GATTTTACAG CCCTTGGAAC CAATCCGTTA TTTCTCATCA ACGGCCCCAC TGGCGCGGGT
AAGACGACCT TGCTCGATGG CATTTGTTTT GCGCTCTATG GCAAAACCAC AGGTAATGAG
CGTGAAGGCA GCCAAATGCG CTGCGATATG GCCGACGATA GTTTACTAAC AGAAGTCACT
TTCAGTTTTC AGCTCGGTAG TAACAGCTAT CGTATTCGCC GGGTGCCAGA GCAAGACAGA
GTTAAGAAAA GCGGTGACGG CTCGACAGTG CAAAAGCCTG AAGCGCAGCT CTTTAAAATT
GACGCCGATG GCAATGAAAG CTTATTAGTT GCCAGTAAAG TGTCCGAGGC CACCGCTGAG
ATTGAAGCTT TGACTGGGCT CGATGTGGAG CAGTTTCGCC AAGTGATGGT ATTACCTCAG
GGTAAGTTTC GCGAATTATT AATGGCGGAC TCTAAAGCGC GTGAGCTGAT ATTTAGTCAG
TTATTTCAAA CGCATATTTA TCGCCGGATT GAAGATACTT TAAAAAATAA GGCTGCCGAT
ATTAGCGCCT TAGTGAAAGA TCAACGCAGC CGCCGCGATG GTATTTTACA AAGTGCGGGC
CTAGCATCCG ATGACGAGCT AAGCAATGAA TTAGCCAAGC TCACACCTGA ACTTGCGCTC
GCTCAAAGTG CCAAGGAACA GGCATTACAG CAGCAACAAT TAATCATTAA AGCCAGCGAT
GCCGCCCAGC ATCTACTGGC TGAGTTTGCG CAGTTTGATA CCTTAACTCA AACGGCTGCA
GCGCTCGAGG CGCAGCAAGA AAGCATAGTC GCGCAAACCC ATAAGCTGAA CTTAGCCGAA
CAAGCGCAGC GTTTAGCGCC TATGATTGAG GTGTTTTTGG CTCGTGAACA AGAAGCAAAA
GCCGCCAATC TCGCTTTTAG TCATGCGCAA ACGGCGTTGA CTCAGGCCAA GCAAGCCTTT
GATGATGCCG AGCTCAAAGC GCAAGACTTA CCCGTATTGG AAGCGTCGCT ACTGGAACAG
GAACAAGCCA AACAGCAACT GAATGCGCTA GGGCCGCAGC TTAGGGAACT GGATAGACTC
AATAAAACCC TCGAGCAAGA GCAAGCGCAG TTAGTTAAAG CTAAAACACA GCTTCAGATC
AGTAAAAATG AGTTAACCGC CGCTAGCCAA AAACGCCGTG AACTGGAATC GGCTTTGCCA
CAATTGCAGG CCAACAGCGA CACTCGCCTC ACATTGCAAC AGGCGCACCA GCAGCAACAG
CAGTTATTGT CGACTTATCA GCAATGGCAA CAAGTGGCGG CAAGGGTATC GTCGACAAAG
GCAAAACTTG CCAATGCGAA AGCGCAAGGG CAACAACTCA ATGCCGAGCA TCAGCAAGCA
CAGGTTGCGC ATAAAGCCTT ATTAATAACT TGGCACCAAG GACAGGCAGC CATTTTAGCG
CGGCAATTAC AGCAAGATGA ACCTTGTCCC GTCTGTGGCA GCCAAATCCA TCCGCAGCCA
GCACAGAGCC AAGAGCCGCT CCCAAGTGAT GAAGCGCTGC AATTGGCCCA AGACGCTGAA
ACGACGGCCC AAGAAGTCCT GAGCAAAGCC AGAGCGGAAT ACCGTGGATT ACAAACACAG
TTAGAAACCT TGCAGCAACA AGCGCAAGAT CTCGCGGCCC AATTGGGCAC AGCGGTTGAT
ATTTCTCAAG ATCAACATGC GCATACCTTG TCGCAATATG CATTTTCCCT CACGCAAGCT
GAGCAAGCTC ATCAAGATTT GCAGCAGTTA CAGCAAGAGA TTGTATTGTT GCACGCGCAG
GAAACGCATC TGCAACAAAA GCTGGAGCAA GGACAAACAC ACGACAGTGC TCTGCAATCT
AAAGTGGATT TATTGCAGGG GCAGTTGGCG CACATGCAGC AAAGCGTCCC ACCTGCGCTT
GCAACGCTTG AGGCATTAAC CGCAGCAATA ACGCAAAACC AGCAACAGAT AAGCCATATT
AAACAGCAGA TTGCTGACGT GAGGGCGCTT CAGCAACAAA CAGGGCAAAC CTTTGTTGCA
GCTAAAGCTG CATTGAATGG TGCCGAAAAT ACCGCTGAGG CGGCATTAGC TCAGCAAACG
CGCGCCCAGC AGCAACTCAA TCAGCAATTA GTCGCAGCGG GGTTTACCGA CCAACAGGCC
TTATTTGCGG CCATGCTGGA TGAAGATCAA CTGCATGCAT TAGCCAGCGA GATTGAGGCT
TACCAGCAGC GCAGTGCTTT GACCAAGGCG CAGTGCGAGC AGTTAGCGCT GAAGCTTAAA
GATAAAGTGC CACCCGATAG CATTAAGCTC GCTGCCGAGC TTGAGTCGGC GCAGCAAGCA
TTACACGCAG CAGAGCAGGT ATGGCAGCTA CTTCATACTC GCACAGTATT GCTCACACAA
ACTCAAACCC AGCTCAGTAT TGCAGATACG AAAGCTAAGG CGTTAGACGA TGAATATGCG
GTTATCGGCA CGCTTGCCGA TGTGGCGAAT GGGAAAACAG GAAATAAGAT CAGTTTGCAG
CGTTTTGTGT TAAGCGTACT GCTCGACGAT GTGTTACTCG AAGCGAGCCA TAGGCTGCAT
CTGATGAGTA AGGGACGTTA TCGCTTGCTG CGTAAGGAAG ATAGAGCAAA GGGCAACAAG
GCGTCTGGGC TCGAGTTAGA AGTGGAAGAT GCCTACACCT CAAAAGTGCG CCCAGTGGCA
ACCTTAAGCG GCGGCGAAAG TTTTATGGCG GCCTTGTCCA TGGCGTTAGG GCTATCCGAT
GTGGTGCAAG CTTATGCTGG GGGGATCAAA CTCGACACCT TATTTATCGA TGAAGGCTTT
GGCAGTTTAG ACCAAGATTC ATTGGAATTG GCGATTCGAA CCTTGATGGA TCTGCAGTCT
TCGGGCCGCA TGATAGGGGT GATCTCGCAC GTTTCTGAGA TGAAAGAGCA GATAAATACT
CGCATCGACA TCAATAAAAC CTCACATGGG AGCGAAATGA CGATAGTTTT GCCTTAG
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| Protein sequence | MRPLSLSMSA FGPFASTQTL DFTALGTNPL FLINGPTGAG KTTLLDGICF ALYGKTTGNE
REGSQMRCDM ADDSLLTEVT FSFQLGSNSY RIRRVPEQDR VKKSGDGSTV QKPEAQLFKI
DADGNESLLV ASKVSEATAE IEALTGLDVE QFRQVMVLPQ GKFRELLMAD SKARELIFSQ
LFQTHIYRRI EDTLKNKAAD ISALVKDQRS RRDGILQSAG LASDDELSNE LAKLTPELAL
AQSAKEQALQ QQQLIIKASD AAQHLLAEFA QFDTLTQTAA ALEAQQESIV AQTHKLNLAE
QAQRLAPMIE VFLAREQEAK AANLAFSHAQ TALTQAKQAF DDAELKAQDL PVLEASLLEQ
EQAKQQLNAL GPQLRELDRL NKTLEQEQAQ LVKAKTQLQI SKNELTAASQ KRRELESALP
QLQANSDTRL TLQQAHQQQQ QLLSTYQQWQ QVAARVSSTK AKLANAKAQG QQLNAEHQQA
QVAHKALLIT WHQGQAAILA RQLQQDEPCP VCGSQIHPQP AQSQEPLPSD EALQLAQDAE
TTAQEVLSKA RAEYRGLQTQ LETLQQQAQD LAAQLGTAVD ISQDQHAHTL SQYAFSLTQA
EQAHQDLQQL QQEIVLLHAQ ETHLQQKLEQ GQTHDSALQS KVDLLQGQLA HMQQSVPPAL
ATLEALTAAI TQNQQQISHI KQQIADVRAL QQQTGQTFVA AKAALNGAEN TAEAALAQQT
RAQQQLNQQL VAAGFTDQQA LFAAMLDEDQ LHALASEIEA YQQRSALTKA QCEQLALKLK
DKVPPDSIKL AAELESAQQA LHAAEQVWQL LHTRTVLLTQ TQTQLSIADT KAKALDDEYA
VIGTLADVAN GKTGNKISLQ RFVLSVLLDD VLLEASHRLH LMSKGRYRLL RKEDRAKGNK
ASGLELEVED AYTSKVRPVA TLSGGESFMA ALSMALGLSD VVQAYAGGIK LDTLFIDEGF
GSLDQDSLEL AIRTLMDLQS SGRMIGVISH VSEMKEQINT RIDINKTSHG SEMTIVLP
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