| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1639 |
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| Symbol | |
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| ID | 5369491 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1984129 |
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| End bp | 1985274 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640829837 |
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| Product | nuclease SbcCD, D subunit |
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| Protein accession | YP_001365847 |
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| Protein GI | 153000166 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0420] DNA repair exonuclease |
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| TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0728377 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTTA TCCACACCTC GGACTGGCAC ATAGGTCGTC AGTTACACAA TCAGTCATTA
CTGGATGATC AAGCCTTTGT GCTCGAGCAA ATTATTGCCT TAGCAGATGA GCATAAGGTG
GATGCTGTGA TTGTGGCGGG GGATATTTAT GACAGATCGA TTCCGCCAGC AAACGCGGTT
GCGCTGTTAG ATGATGTGCT CAACCGCTTA GTACAAGATT TAGGCCTGCA AGTGATTATG
ATTGCCGGTA ACCACGATGG CCACGAGCGC TTAGGGTTTG CGGCAAAACA AATGGCGACA
AGCGGGTTAC ATATTATTGG GCCTTTGAGT GCTGACATTC CGCCTATTAC ATTGTCGAGT
ACAAGTGGTG ATGTGGTTTT TTATCCCTTG CCTTACGCTG AACCTGCCAC AGTGCGGCAA
GTGTTTGAGT GTGAGGCATC GAGCCACGAA ATGGCCATGG ATGTGTTGCT GGCAAAAGTG
CGTCAGCACG ATAGCCAAGG CTTACCCAAA GTGGTGATCA GCCATTGCTT TTTGGATGGT
GGCAGCGAAT CCGAATCAGA GCGGCCGCTC AGTATTGGTG GCGCCGATAA AATATCGCCA
AAGCTCTTTA CTGAGTTTGA TTATGTCGCC CTTGGGCATT TACACGGACC GCAATACAAA
GGCGCCGAGC ATGTGCGCTA CTCTGGCTCG ATTTTGAAGT ATTCCTTTAG CGAACAACAT
CAACACAAGT CGGTGACCTT AGTCGAACTG GGCACGCAAA CGCCGATTGA TATCCGTTTA
TTGCCGTTAA CGTCGATGCG TGATGTCCGC ATCTTAGAAG GGGAGTTAGA CACTTTACTC
GCCCAAGGTA AAACGGATGC AAAGCGTGAG GATTACCTTA TGGTCAGGCT CCTCGATAAA
CATGCCATTT TAGACGCTAT GGGCAAACTT AGGGCCGTCT ACCCTAATGT GCTGCATTTA
GAGCGGACAG GCCTAATGGC GGGGCAGCAA CAGGTCGCTT TGAGCCGGGA TCATATCAAA
AAAGGCGAGA TGGACATGTT CTGTGACTTT TTCTCCCAGG TGTCTGGCGA GTCATTGACG
CAGGCACAGC AAGCCGTGAT GGATGACCTC CTGACTAAGC TACACAATGA GGAGCGCCAA
GCATGA
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| Protein sequence | MKFIHTSDWH IGRQLHNQSL LDDQAFVLEQ IIALADEHKV DAVIVAGDIY DRSIPPANAV
ALLDDVLNRL VQDLGLQVIM IAGNHDGHER LGFAAKQMAT SGLHIIGPLS ADIPPITLSS
TSGDVVFYPL PYAEPATVRQ VFECEASSHE MAMDVLLAKV RQHDSQGLPK VVISHCFLDG
GSESESERPL SIGGADKISP KLFTEFDYVA LGHLHGPQYK GAEHVRYSGS ILKYSFSEQH
QHKSVTLVEL GTQTPIDIRL LPLTSMRDVR ILEGELDTLL AQGKTDAKRE DYLMVRLLDK
HAILDAMGKL RAVYPNVLHL ERTGLMAGQQ QVALSRDHIK KGEMDMFCDF FSQVSGESLT
QAQQAVMDDL LTKLHNEERQ A
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