| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1619 |
|---|
| Symbol | |
|---|
| ID | 5371149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1958339 |
|---|
| End bp | 1960768 |
|---|
| Gene Length | 2430 bp |
|---|
| Protein Length | 809 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640829819 |
|---|
| Product | DNA polymerase II |
|---|
| Protein accession | YP_001365829 |
|---|
| Protein GI | 153000148 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000233393 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCTG AGGCAACAAC GGCCGTTAGT GTACAAGGTC GAGTCTTAAC ACGCCATGCG
ATTCATCGTC ATGGGAGTTT AGTGTTGCAG TATTATCTGG CGACCGCCCA AGGTCCTGTG
CTGGTGGAAG TGCAAGGCAC TGAACACATT TGTTTTTGTC ATCAAACGGA TGTGGCGGCT
TTACAGTTAC AAACGCCGGG TCAAGCATTG CGATTTGTGC CATTAGCGCT CAAAAGCTTT
AAAGGCGGCT CCGTCAGTGG AGTTTATGCT AAATCGAGCA ACAGCTTACG TACCTTACAG
CGCATCGCAA AAGATGCCGA TATCCCTTTA TTTGAAGCGG ATATTCGCCC TGAACAGCGT
TATTTAATCG AGCGGTTTGT GGCGCTGGAT GTGGCATTTT TAGGGCATTT CTCTGCGCCG
ACTAGCGACA GTCTTGAGGC TAACTCGCTG CCCGTGTTTA TCGCCGAGCG GGCTAAGAGT
ATTGCCCCTT TAACGGCGGT GAATTTACGC TGTATCTCAC TGGATTTTGA ATGCAGCTTT
GAGGGCTTAC TCTATTCGGT GGCGCTATAT GGTCAAGACA GTGGCCGAGA CGAGGGGCAA
GGCAGCCTCA AGCAGACTTA TGAAAAAGTG ATTATGGTGG GCGAAGCTGA ATCAAACACC
CCCGAATATA TTGAATGGGT GGCCGATGAA GCGGCGCTGA TCCATCGATT AATCGCGTGG
TTCCATGAGT TTGATCCTGA CTTTATTATC GGTTGGTCAG TGGTGAGTTT CGATCTCGCG
CTATTGTCAC GCCGTGCTCT ATTACACCGT ATTCCGCTCA CCATTGGCCG CGGTGGCGCT
AAGCTCGATT GGAAAGTTGA CAATAAGTTT CGCCCAGAAA CCTTAGTTTT GCCGGGCCGT
GTGGTACTCG ATGGTATCGA TTGGCTTAAA GCCGCTTTTT ATCACTTTGA GCGTTTTTCG
CTTGAATTTG TGTCACGGCA CCTATTAGGT GAAGGCAAGG CCATTCATAA CGTCGATAAC
CGCGTTGAAG AAATTGACCT GCTGTTTAAG ACCGATAAAC AAGCCTTAGC CCATTATAAT
CTTACCGATA GCCGCCTAGT GTGGGATATT TTTACTCACA CTCAATTGTG GGATTTTGCC
CTCGCGCGTG CCGAACTGAC AGGTTTAGAA CTGGGGCGGG TAGGGGCCTC AGTGGCGGCG
TTTAATCATT TGTATTTACC ACATCTACAT CGCGCGGGAT ATGTCGCTCC AGCAGAGCCT
GTGAGTCAGG GCATTGAAAG TCCTGGCGGC TATGTGATGG ATTCTGTGCC GGGTCTTTAT
AAACACATCT TAGTGTTCGA TTTTAAAAGT CTGTATCCCT CCATTATTCG CACCTTTTTG
ATCGATCCTA AGGGATTAAT TGAAGGCTTG CAGTTGCCCG AGTCTGAATG TGTTGCGGGT
TTTCTTGGCG GCCGTTTCAG TCGGCAACAG CCTATTTTAC CTAAGCTAAT TCAAACCTTA
TCTGAGCAGC GCGAAAAGGC CAAGCGTGAG CACAATGCGC CGTTATCCCA GGCGATAAAA
ATTATCATGA ACTCGCTGTA TGGGGTTTTA GGCTCTCAAG GCTGCGTGTT CCATGATGCT
AAGTTGGCAA GTTCGATCAC GATGCGCGGC CATCAAATCA TGAAACAAAC CCGCGCATGG
ATAGAAGAGA TGGGCTATCA AGTGATTTAT GGCGATACGG ATTCGACCTT TGTGTGGCTT
GGCAGCGAGC CTGATCTCTC AGACATTAAC GCCTTAGGTA ACACTCTGGC GCAGGATATC
AATGCTAAGT GGCAGGCTAA AATCTGTGCT GATCACCAAG TTGAGAGTTT TCTCGAGTTA
CAGTTTGAGC GGCATTACGA GCAGTTCTTT ATGCCAACCT TAAGAGGCTC ATTAGAAGGC
AGTAAAAAAC GTTATGTTGG CGCGTGGCGC AATGCGAGCG ATGAACTTGA GCTCACCTTT
AAAGGTATGG AACAAGTGCG CAGTGATTGG AGCCCCTTAG CGCGCAAAGT CCAAGAGTCA
CTCTATGAGC GAATGTTTAA CCAAAGGGAT ATCAGTGTTT ATTTAGCCAG CGTGTTTGAA
AAACTACTTG ATGGTCAGTT GGATAATGAT TTGGTATTTC GTAAACGCAT GCGGCGCAAT
ATTGAAGATT ACACGGCTAA ATCTTCACCA CATGTTAAAG TCGCCCAGCA ACTATGCGGC
TTAACAGGTG ATGTCTCTTT TGGCAAGCGT GGGGCGCAAA TTGACTACCT GATTACTGTA
AATGGACCGG AACCCTTACT GTACAGAACG TCACCAATTG ATTACCAATA CTACATTGAT
AAGCAAATTG GCCCTATTGC AGAACCGGTA TTTTCGATAA TGAAACTAAA CTACATGGAT
ATTGCGTCAA AGCAGTTGCT GTTAATATAG
|
|---|
| Protein sequence | MKPEATTAVS VQGRVLTRHA IHRHGSLVLQ YYLATAQGPV LVEVQGTEHI CFCHQTDVAA
LQLQTPGQAL RFVPLALKSF KGGSVSGVYA KSSNSLRTLQ RIAKDADIPL FEADIRPEQR
YLIERFVALD VAFLGHFSAP TSDSLEANSL PVFIAERAKS IAPLTAVNLR CISLDFECSF
EGLLYSVALY GQDSGRDEGQ GSLKQTYEKV IMVGEAESNT PEYIEWVADE AALIHRLIAW
FHEFDPDFII GWSVVSFDLA LLSRRALLHR IPLTIGRGGA KLDWKVDNKF RPETLVLPGR
VVLDGIDWLK AAFYHFERFS LEFVSRHLLG EGKAIHNVDN RVEEIDLLFK TDKQALAHYN
LTDSRLVWDI FTHTQLWDFA LARAELTGLE LGRVGASVAA FNHLYLPHLH RAGYVAPAEP
VSQGIESPGG YVMDSVPGLY KHILVFDFKS LYPSIIRTFL IDPKGLIEGL QLPESECVAG
FLGGRFSRQQ PILPKLIQTL SEQREKAKRE HNAPLSQAIK IIMNSLYGVL GSQGCVFHDA
KLASSITMRG HQIMKQTRAW IEEMGYQVIY GDTDSTFVWL GSEPDLSDIN ALGNTLAQDI
NAKWQAKICA DHQVESFLEL QFERHYEQFF MPTLRGSLEG SKKRYVGAWR NASDELELTF
KGMEQVRSDW SPLARKVQES LYERMFNQRD ISVYLASVFE KLLDGQLDND LVFRKRMRRN
IEDYTAKSSP HVKVAQQLCG LTGDVSFGKR GAQIDYLITV NGPEPLLYRT SPIDYQYYID
KQIGPIAEPV FSIMKLNYMD IASKQLLLI
|
|---|
| |