Gene Shew185_1612 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1612 
Symbol 
ID5371691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand+ 
Start bp1951763 
End bp1952131 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content47% 
IMG OID640829811 
Producthelix-hairpin-helix repeat-containing competence protein ComEA 
Protein accessionYP_001365822 
Protein GI153000141 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATCA CCAAATGTAT ACCCGCTATT ATGAGCGCCA TGGCATTAAC GGCTTTTTTA 
ACAACGCCAG CAATCGCCGC AGACACCCCG ACTAAAGCCG CCGCTAAAAT GCAGACTCAG 
GCTAAAACCG AGGCGAGCGA TATGGCATCT GATGCGAAGA AAGCTATGCC GGATGCTGCT 
CAAGTCAACA TCAATACAGC TTCAGCCGAG CAGTTACAAG TGCTAAAAGG GATAGGTGCC 
GCTAAGGCGC AAGCGATTGT CGATTACCGA ACCAAAAATG GTAAGTTCAA TGCAATTGAT 
GATTTAGCCA ATGTCTCGGG TGTTGGGGCT AAGTTGATTG AGCAGAATCG TCATTTGATT 
AAGTTGTAA
 
Protein sequence
MNITKCIPAI MSAMALTAFL TTPAIAADTP TKAAAKMQTQ AKTEASDMAS DAKKAMPDAA 
QVNINTASAE QLQVLKGIGA AKAQAIVDYR TKNGKFNAID DLANVSGVGA KLIEQNRHLI 
KL