Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1604 |
Symbol | |
ID | 5372166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1942864 |
End bp | 1944441 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640829803 |
Product | extracellular solute-binding protein |
Protein accession | YP_001365814 |
Protein GI | 153000133 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTGGT TGTTGGTCGC GTGTGGCCCC CAACGACTCC CTTCCGGTTT GGTGTATTGC TCCGAAGGGA ACCCTGAGTC TTTTAATCCA CAATTGGTGA CGTCTGGCAC GACAATCGAT GCCACCTCGC ACCAAATTTA TAGTCGCTTA GTGGATTATG ATACCCAGTC AGGCAAGCTT GTCCCTGCCT TGGCGACAAG TTGGGCTATG TCCGATGATG GCTTAAGCTA TCGCTTCACC CTCAGGGAAA ACGTGCAGTT CCAGCATTCG AAGAGGTTTA CCCCAACACG GCCCTTCAAT GCCGACGATG TGTTGTTCTC CTTTAAGCGT ATTATCGATA CCCAGCATCC TTATCATTTT GTCTCCCGCA CGGGTTATCC CTTCTTCCAA AGTATTGGCT TTTCTGAACA AGTTAAAGGG ATAGAAAAGA TAAACGATCA TGAAGTGGTC TTTTATTTAA CCCGCAAAGA CGCTTCTTTT TTATCAAATC TGGCCACCGA CTTTGCGGTG ATCTTATCCG ATGAATATGC GCAGCAGCAG TTAGCCTTGG GTCATCCTGA AAACGTCGAC CACTTTGCCA TTGGCACAGG GCCGTTCACT TTAGTTCAGT ACGCGAAAAA CGAATATATT CGCTATCGCC GTCATCCTGA CTTTTGGGGC GAACCAGCAA AAATTGATAT GCTGGTATTT GATATCACGC CAAAAAGTAC CGTCAGACTC GCGAAACTGA TCGCGGGGGA TTGCAGTGTA TCTGCGCTGC CCAAAGCGGG TGAACTGCCC GTTATCAAGC AACATGAAGA ATTGAATATT GAGTCACAAC CTGGACTCAA CGTAGCATTT TGGGCCTTTA ATACGCAAAA GCCGCCACTG AATGATGTCC GAGTACGCCG CGCACTGGCC TATGCGGTAG ATAAACAAAA TATCCTGCGG GCGGTTTATC AAAATACCGC CATTGAAGCC ACAGGCGTTC TGCCGCCAGC ATCTTGGGCC TACGACAATA ACAAAGGGCT TGTGGATTAC AATCCGCAAA AAGCGCGCGA CCTATTAAAA GAAGCTGGCA TTAAAAATCT CAGTATCGAT ATTTGGGCTA TGCCAGTTGC CCGCGCCTAT AACCCCAATG CGTTAAAAAC GGCTGAATTA ATTCAATCGG ATCTGGCCAA CATAGGCGTC AAAGTGAACA TCGTCAGTTA CGACTGGAGC GTGTTTAGTC AGCGGCTCAG CCGCGACGAC TATGATTCAG TGTTAATTGG CTGGAATGCT GATAATAGCG ATCCCGATAA CTTCTTTACT CCATTGCTGA GCTGCGCCGC AATGCAGTCG AATAACAATC GTTCTCGCTG GTGTAACCCT GAGTTTGATG CCATCTTAGA TAACGCAAGA GAAGTGTCAG ATCAGGGCGA ACGTAAAGTG ATTTATCAAC AAGCAGAAGC CTTTTTAGCT GAACAAGTGC CTATGCTGAG TCTGGCCCAT GCCAAACGTG TGGCGTTAAC TCGCCATGAT GTCAAAGACA TGCAACTCAC GCCTTTTGGG GGCATTTCCT TCGCCCAAAC TAGCCAAGCA CAAGAGGAGG CGAATTAA
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Protein sequence | MSWLLVACGP QRLPSGLVYC SEGNPESFNP QLVTSGTTID ATSHQIYSRL VDYDTQSGKL VPALATSWAM SDDGLSYRFT LRENVQFQHS KRFTPTRPFN ADDVLFSFKR IIDTQHPYHF VSRTGYPFFQ SIGFSEQVKG IEKINDHEVV FYLTRKDASF LSNLATDFAV ILSDEYAQQQ LALGHPENVD HFAIGTGPFT LVQYAKNEYI RYRRHPDFWG EPAKIDMLVF DITPKSTVRL AKLIAGDCSV SALPKAGELP VIKQHEELNI ESQPGLNVAF WAFNTQKPPL NDVRVRRALA YAVDKQNILR AVYQNTAIEA TGVLPPASWA YDNNKGLVDY NPQKARDLLK EAGIKNLSID IWAMPVARAY NPNALKTAEL IQSDLANIGV KVNIVSYDWS VFSQRLSRDD YDSVLIGWNA DNSDPDNFFT PLLSCAAMQS NNNRSRWCNP EFDAILDNAR EVSDQGERKV IYQQAEAFLA EQVPMLSLAH AKRVALTRHD VKDMQLTPFG GISFAQTSQA QEEAN
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