Gene Shew185_1590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1590 
SymbolcysS 
ID5373207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1925455 
End bp1926834 
Gene Length1380 bp 
Protein Length459 aa 
Translation table11 
GC content47% 
IMG OID640829786 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001365800 
Protein GI153000119 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.84367e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGAAGA TTTACAACAG TATTACCCGC CAAAAACAGG AATTTAAGCC GATTACTCCC 
GGAAAAATTG GGATGTACGT GTGTGGTGTG ACCATATACG ATCTCTGTCA TATTGGTCAT
GGCCGTACTT TTGTTTCCTT TGACATGATA GTGCGCTACC TGCGTTACGC GGGTTATGAA
GTGAATTTTC AGCGCAATAT CACCGATGTT GATGACAAAA TCATCAAGCG CGCTAACGAG
AATAACGAAA GCTGTGAAGC CTTAACCGAG CGTTTGATCG GTGAAATGCA TCAAGACTTC
GATGCCTTAA ATATGTTGCG CCCAGACTTT GAACCGCGCG CAACCCTGCA TATTGCCGAA
ATCATCGACA TGGTTGAGTT ATTACTCGCC CGTGGCCATG CCTATGTGGC GAGCGATGGT
GATGTGCTTT TCAGCGTGGC TTCCTATCCT GATTACGGCC GTTTATCGGG CCAGAATTTA
GATCAACTGC AAGCCGGTGC TCGGGTTGAA GTGGACGAAA CCAAACAAAA TCCAATGGAT
TTTGTGTTGT GGAAAATGTC TAAACCTGGT GAACCAACGT GGGAATCGCC ATGGGGACCG
GGTCGTCCAG GCTGGCATAT CGAATGTTCG GCCATGAACA GTAAGCATTT AGGTCTGCAT
TTTGATATTC ATGGCGGCGG CTCTGATTTA CAGTTCCCGC ACCATGAGAA CGAAATCGCC
CAGTCTTGCT GTGCCCATGA CACGCCATAC GTGAACTATT GGATGCACAC TGGCATGGTG
ATGGTTGACC GTGAAAAAAT GTCTAAGTCA TTAGGCAATT TCTTTACCAT TCGCGATGTA
CTTGGTCACT ATGATGCTGA AACTGTGCGT TATTTCCTGT TATCTGGCCA TTACCGTAGC
CAACTGAACT ATTCAGAAGA TAACTTGAAA CAAGCTCGCT CAGCTTTAGA GCGTTTGTAT
ACCGCTATTA AAGATGTCGA CTTGACTGTC GCTGCGGCGC CAGCAGAAGA GTTTGTCGCG
AAATTTAAAG CGGCGATGGA TGATGACTTT AATACACCTG AAGCCTACTC AGTCCTGTTT
GACATGGTAC GTGAGATCAA TCGCTTAAAA CTGACCGATA TGGCACAGGC ATCGGCATTA
GCAGTCACCT TGAAGCAATT AGCGGATGTT TTAGGCTTAT TAAGCCAAGA GCCTGAAGCT
TTCTTCCAAG GCGGCGGTAG TGATGATGAA GTGGCTGAAA TCGAAGCTTT AATCGTTGAA
CGTAACCGTG CTCGTACTGA AAAGGACTGG GCTGCTGCGG ATGTGGCGCG TAACCGTTTG
AATGAGTTAG GCGTTGAGCT CGAAGATGGC CCAAGTGGTA CCACTTGGCG TAAGAAATAA
 
Protein sequence
MLKIYNSITR QKQEFKPITP GKIGMYVCGV TIYDLCHIGH GRTFVSFDMI VRYLRYAGYE 
VNFQRNITDV DDKIIKRANE NNESCEALTE RLIGEMHQDF DALNMLRPDF EPRATLHIAE
IIDMVELLLA RGHAYVASDG DVLFSVASYP DYGRLSGQNL DQLQAGARVE VDETKQNPMD
FVLWKMSKPG EPTWESPWGP GRPGWHIECS AMNSKHLGLH FDIHGGGSDL QFPHHENEIA
QSCCAHDTPY VNYWMHTGMV MVDREKMSKS LGNFFTIRDV LGHYDAETVR YFLLSGHYRS
QLNYSEDNLK QARSALERLY TAIKDVDLTV AAAPAEEFVA KFKAAMDDDF NTPEAYSVLF
DMVREINRLK LTDMAQASAL AVTLKQLADV LGLLSQEPEA FFQGGGSDDE VAEIEALIVE
RNRARTEKDW AAADVARNRL NELGVELEDG PSGTTWRKK