Gene Shew185_1589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1589 
Symbol 
ID5369632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1924820 
End bp1925314 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content44% 
IMG OID640829785 
Productpeptidyl-prolyl cis-trans isomerase cyclophilin type 
Protein accessionYP_001365799 
Protein GI153000118 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.17175e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCACAA TACACACCAA TTTGGGCGAC ATTAAACTGC AACTGAACGC TGAAAAAGCG 
CCATTAACAG TAGCAAACTT TATGAAATAT GTTGACGAAG GTTTCTTCGA CGGCACTATC
TTCCACCGTG TGATTGACGG TTTCATGATC CAAGGTGGTG GCTTCAACGA AGACATGAGC
CAAAAGCGTT GTAACGAGCC AGTGAAAAAC GAAGCCAATA ACGGTTTATC AAACCGTACT
GGTACTGTCG CTATGGCACG TACTTCTGAT CCACATTCAG CCACTGCACA GTTCTTCATT
AACGTGAACG ACAACACTTT CCTCGATTTC AAATCAGAAA CCTCACAGGG CTGGGGCTAC
TGCGTATTCG GCGAAATCGT TGAAGGCATG GATATTATCG AAAAAATCAA AGCTGTTAGC
ACTGGCAACC GTGGCATGCA TCAAGATGTG CCATTAGAAG CCATTGTGAT TGAAAAAGTC
AGCGTTGCGG CATAA
 
Protein sequence
MITIHTNLGD IKLQLNAEKA PLTVANFMKY VDEGFFDGTI FHRVIDGFMI QGGGFNEDMS 
QKRCNEPVKN EANNGLSNRT GTVAMARTSD PHSATAQFFI NVNDNTFLDF KSETSQGWGY
CVFGEIVEGM DIIEKIKAVS TGNRGMHQDV PLEAIVIEKV SVAA