Gene Shew185_1578 details

Gene Information

• Locus tag: Shew185_1578
• ID: 5373802
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella baltica OS185
• Kingdom: Bacteria
• Replicon accession: NC_009665
• Strand: -
• Start bp: 1907448
• End bp: 1909400
• Gene Length: 1953 bp
• Protein Length: 650 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 640829774
• Product: decaheme cytochrome c
• Protein accession: YP_001365788
• Protein GI: 153000107
• TIGRFAM ID: [TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family

Plasmid Coverage information

• Num covering plasmid clones: 3
• Plasmid unclonability p-value: 0.0000205402
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGAACG CACAAACAAC TAAAATCGCA CTGCTGTTAG CAGCAAGTGC AGTCACTATG 
GCCTTAACGG GCTGTGGTGG CAGCGATGGT AATGATGGTA ATCCCGGTGA ACCTGGTGGT 
GAACCTGCTC CAGCGATTCA AATCCTTAAT TTCACGTTTG ATAAATCTGT CATCACTAAC 
GGTGTACCGA GTGTTGAGTT TACCGTCACT AACGAAAATG ATTTACCCGT CGTTGGTCTC 
CAAAAAATGC GCTTCGCCGC AGCACAGTTG ATCCCACAAG GTGCGACTGG TGCTGGTAAT 
GCCTCACAAT GGCAATACTT TGGTGATGAA ACCTGCGATG TCGCAGCAAC ATGCCCAGGG 
ACCTTTGTTG ACCAGAAAAA CGGTCACTAC AGCTATACCT TCAACATGAA CCTGACCGCT 
AACGCTAAAA TCACCTACAA CGATCAGTTA GCTCAACGGG TGTTAATCCG CGCTTATAAC 
ACGCCGTTAC CCGATGGTAC TCAAGTCCCT AACAGTAACG CCTTTGTCGA CTTTACGGCC 
GATACCGGTG CTGCACCGAC ATACAGCCGC AAAATTGTTG CCACTGAAAG CTGTAATACC 
TGTCACCAAG ATTTAGCCAA TGTGAAACAC GGCGGCGCGT ACTCAGATGT TAACTACTGT 
GCAACTTGCC ACACAGCTGG CAAAGTTGGC GTAGGTAAAG AGTTCAATGT TCTCGTTCAC 
GCTAAACACA AAGACCTGAC TTTAGGTTCA TTGGAAAGCT GCCAAAGCTG TCATGCTGCA 
AACGATGCCG CGCCAGATTG GGGTAATTGG TCACGTATTC CAACTGCCGC AACCTGTGGA 
AGCTGTCATA GCACAGTGGA CTTCGCCGCA GGTAAAGGCC ATTCACAACA GCTAGATAAC 
TCTAACTGTA TCGCCTGTCA TAACAGCGAC TGGACTGCTG AGCTACACAC AGGCAAGACT 
GCTGACAAGA AAGCCGTTAT CGCTCAGTTA GGTATGCAAG CGACTCTCGT GGGTCAAACT 
GATGATACTG CGGTATTAAC CGTCTCTATC TTAGACAAAG ACGGTAACGC GATTGATGCG 
GCAACGGTTC AAGACAAGAT TAAACGTTTA GAAACTGTCA CTAACGTTGG CCCTAACTTC 
CCAATTATGG GTTACAACAA GAGCCCAGGT AGTGGTGCTG CGAAAATTGC TAAAGACTTA 
GTCAAAGATG GCGCACTACA AGCTGGCGTG ACCTTAGTTG ACGGCAAACT GGTTTTCACT 
ACACCTGCCC TGCCTTTCGG TACTGGCGAT ACAGATACGG CCTTTACTTT TATCGGTCTG 
GAAATGTGTA GCACAGGTAC TAGCTTAACG GCATGTACCG TTGATAGCGC AACCACCAGT 
ATGAAAGCAG AGCTCGCCTT TGGTACTAAA TCAGGCAACG CCCCAAGCAT GCGCCATGTT 
AACTCAGTTA ACTTCAGCAC CTGTCAAGGC TGTCACAGCG ATACCTTTGA AATCCACAAA 
GGCCACCATT CAGGTTTTGT GATGACAGAG CAAGTATCAC ACGCAAAAGA TGCGAACGGT 
AAAGCGATCG TCGGTGTTGA TGGTTGTGTC GCGTGTCATA CACCTGATGG TACTTATGCT 
TCTGGTGCTA ACAAAGGCGC ATTCGAGATG AAACTGCACG TGATCCACGG CGAGCAAGGT 
GTCATCAAAG AATGTACCCA ATGTCACAAC GATTTCAACC TAGATGCATT CAAAGTGAAA 
GGCGCCCTGG CAACATCAGC AGGTAAATAC ACCACGCCAA TCACAGCCAC TTGTACTTCA 
TGCCACGCGC CAGAATCCAT TGGCCACGGC TTAGAAAACA TGGGCGCGAT TGTGAACGGT 
GATTATGTTC AAGCTAACCA AGCGGCGCAG TCAGAAACCT GTTTCTACTG TCACAAACCC 
ACACCAACAG ATCACACTCA GGTGAAAATG TAA 

 

Protein sequence

MMNAQTTKIA LLLAASAVTM ALTGCGGSDG NDGNPGEPGG EPAPAIQILN FTFDKSVITN 
GVPSVEFTVT NENDLPVVGL QKMRFAAAQL IPQGATGAGN ASQWQYFGDE TCDVAATCPG 
TFVDQKNGHY SYTFNMNLTA NAKITYNDQL AQRVLIRAYN TPLPDGTQVP NSNAFVDFTA 
DTGAAPTYSR KIVATESCNT CHQDLANVKH GGAYSDVNYC ATCHTAGKVG VGKEFNVLVH 
AKHKDLTLGS LESCQSCHAA NDAAPDWGNW SRIPTAATCG SCHSTVDFAA GKGHSQQLDN 
SNCIACHNSD WTAELHTGKT ADKKAVIAQL GMQATLVGQT DDTAVLTVSI LDKDGNAIDA 
ATVQDKIKRL ETVTNVGPNF PIMGYNKSPG SGAAKIAKDL VKDGALQAGV TLVDGKLVFT 
TPALPFGTGD TDTAFTFIGL EMCSTGTSLT ACTVDSATTS MKAELAFGTK SGNAPSMRHV 
NSVNFSTCQG CHSDTFEIHK GHHSGFVMTE QVSHAKDANG KAIVGVDGCV ACHTPDGTYA 
SGANKGAFEM KLHVIHGEQG VIKECTQCHN DFNLDAFKVK GALATSAGKY TTPITATCTS 
CHAPESIGHG LENMGAIVNG DYVQANQAAQ SETCFYCHKP TPTDHTQVKM