Gene Shew185_1578 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1578 
Symbol 
ID5373802 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1907448 
End bp1909400 
Gene Length1953 bp 
Protein Length650 aa 
Translation table11 
GC content48% 
IMG OID640829774 
Productdecaheme cytochrome c 
Protein accessionYP_001365788 
Protein GI153000107 
COG category 
COG ID 
TIGRFAM ID[TIGR03507] decaheme c-type cytochrome, OmcA/MtrC family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.05402e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAACG CACAAACAAC TAAAATCGCA CTGCTGTTAG CAGCAAGTGC AGTCACTATG 
GCCTTAACGG GCTGTGGTGG CAGCGATGGT AATGATGGTA ATCCCGGTGA ACCTGGTGGT
GAACCTGCTC CAGCGATTCA AATCCTTAAT TTCACGTTTG ATAAATCTGT CATCACTAAC
GGTGTACCGA GTGTTGAGTT TACCGTCACT AACGAAAATG ATTTACCCGT CGTTGGTCTC
CAAAAAATGC GCTTCGCCGC AGCACAGTTG ATCCCACAAG GTGCGACTGG TGCTGGTAAT
GCCTCACAAT GGCAATACTT TGGTGATGAA ACCTGCGATG TCGCAGCAAC ATGCCCAGGG
ACCTTTGTTG ACCAGAAAAA CGGTCACTAC AGCTATACCT TCAACATGAA CCTGACCGCT
AACGCTAAAA TCACCTACAA CGATCAGTTA GCTCAACGGG TGTTAATCCG CGCTTATAAC
ACGCCGTTAC CCGATGGTAC TCAAGTCCCT AACAGTAACG CCTTTGTCGA CTTTACGGCC
GATACCGGTG CTGCACCGAC ATACAGCCGC AAAATTGTTG CCACTGAAAG CTGTAATACC
TGTCACCAAG ATTTAGCCAA TGTGAAACAC GGCGGCGCGT ACTCAGATGT TAACTACTGT
GCAACTTGCC ACACAGCTGG CAAAGTTGGC GTAGGTAAAG AGTTCAATGT TCTCGTTCAC
GCTAAACACA AAGACCTGAC TTTAGGTTCA TTGGAAAGCT GCCAAAGCTG TCATGCTGCA
AACGATGCCG CGCCAGATTG GGGTAATTGG TCACGTATTC CAACTGCCGC AACCTGTGGA
AGCTGTCATA GCACAGTGGA CTTCGCCGCA GGTAAAGGCC ATTCACAACA GCTAGATAAC
TCTAACTGTA TCGCCTGTCA TAACAGCGAC TGGACTGCTG AGCTACACAC AGGCAAGACT
GCTGACAAGA AAGCCGTTAT CGCTCAGTTA GGTATGCAAG CGACTCTCGT GGGTCAAACT
GATGATACTG CGGTATTAAC CGTCTCTATC TTAGACAAAG ACGGTAACGC GATTGATGCG
GCAACGGTTC AAGACAAGAT TAAACGTTTA GAAACTGTCA CTAACGTTGG CCCTAACTTC
CCAATTATGG GTTACAACAA GAGCCCAGGT AGTGGTGCTG CGAAAATTGC TAAAGACTTA
GTCAAAGATG GCGCACTACA AGCTGGCGTG ACCTTAGTTG ACGGCAAACT GGTTTTCACT
ACACCTGCCC TGCCTTTCGG TACTGGCGAT ACAGATACGG CCTTTACTTT TATCGGTCTG
GAAATGTGTA GCACAGGTAC TAGCTTAACG GCATGTACCG TTGATAGCGC AACCACCAGT
ATGAAAGCAG AGCTCGCCTT TGGTACTAAA TCAGGCAACG CCCCAAGCAT GCGCCATGTT
AACTCAGTTA ACTTCAGCAC CTGTCAAGGC TGTCACAGCG ATACCTTTGA AATCCACAAA
GGCCACCATT CAGGTTTTGT GATGACAGAG CAAGTATCAC ACGCAAAAGA TGCGAACGGT
AAAGCGATCG TCGGTGTTGA TGGTTGTGTC GCGTGTCATA CACCTGATGG TACTTATGCT
TCTGGTGCTA ACAAAGGCGC ATTCGAGATG AAACTGCACG TGATCCACGG CGAGCAAGGT
GTCATCAAAG AATGTACCCA ATGTCACAAC GATTTCAACC TAGATGCATT CAAAGTGAAA
GGCGCCCTGG CAACATCAGC AGGTAAATAC ACCACGCCAA TCACAGCCAC TTGTACTTCA
TGCCACGCGC CAGAATCCAT TGGCCACGGC TTAGAAAACA TGGGCGCGAT TGTGAACGGT
GATTATGTTC AAGCTAACCA AGCGGCGCAG TCAGAAACCT GTTTCTACTG TCACAAACCC
ACACCAACAG ATCACACTCA GGTGAAAATG TAA
 
Protein sequence
MMNAQTTKIA LLLAASAVTM ALTGCGGSDG NDGNPGEPGG EPAPAIQILN FTFDKSVITN 
GVPSVEFTVT NENDLPVVGL QKMRFAAAQL IPQGATGAGN ASQWQYFGDE TCDVAATCPG
TFVDQKNGHY SYTFNMNLTA NAKITYNDQL AQRVLIRAYN TPLPDGTQVP NSNAFVDFTA
DTGAAPTYSR KIVATESCNT CHQDLANVKH GGAYSDVNYC ATCHTAGKVG VGKEFNVLVH
AKHKDLTLGS LESCQSCHAA NDAAPDWGNW SRIPTAATCG SCHSTVDFAA GKGHSQQLDN
SNCIACHNSD WTAELHTGKT ADKKAVIAQL GMQATLVGQT DDTAVLTVSI LDKDGNAIDA
ATVQDKIKRL ETVTNVGPNF PIMGYNKSPG SGAAKIAKDL VKDGALQAGV TLVDGKLVFT
TPALPFGTGD TDTAFTFIGL EMCSTGTSLT ACTVDSATTS MKAELAFGTK SGNAPSMRHV
NSVNFSTCQG CHSDTFEIHK GHHSGFVMTE QVSHAKDANG KAIVGVDGCV ACHTPDGTYA
SGANKGAFEM KLHVIHGEQG VIKECTQCHN DFNLDAFKVK GALATSAGKY TTPITATCTS
CHAPESIGHG LENMGAIVNG DYVQANQAAQ SETCFYCHKP TPTDHTQVKM