Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1551 |
Symbol | |
ID | 5371449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | - |
Start bp | 1874962 |
End bp | 1876581 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640829747 |
Product | amino acid/peptide transporter |
Protein accession | YP_001365761 |
Protein GI | 153000080 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCAACAG AACAACATCC GCCACACGCT ATGCAAGGCC TACAGGGTTC GCCCCCGCCC GAAATGCTCT TTGGGCATCC TAAGGGCTTG TTTGTCTGCT TTTTTACCGA AATGTGGGAA CGCTTTTCCT TCTACGGCAT GAAGGCGTTA CTGTTTCTTT ATCTGATTAA ATATCACCTG TTTACCGACG AATTTGGCTA TAACGTCATT GGTGCTTATG GTGCCTTAGT GTACGCCATG CCCGTGGTCG GTGGTTTATT GGCCGACCGC TATATCGGCA TGCGTAAAGC GGTGATCTTC GGTGGTATTT TGTTGGTCCT CGGCCACTTA GGCATGGCCT TTGAAGGCCA TCAAGCGGTC ATCGTCGCCG GTGAAGTTCA GCGCGATGAA CAAGCACTGC AGGTGTTCTA TCTATCCCTC GCCTTGATCA TTGTCGGTGT GGGCTTTTTA AAACCTAACA TTTCAACCAT AGTCGGTCAG CTGTATCCCG AGTCATCTCC AAAGCGGGAT TCAGGCTTTA CCATTTTCTA CGCTGGCATC AATTTAGGCG CCACCTTAGC ACCGTTGATT TGTGCTTATT TAGGTGAAAC CTATGGCTGG AAGTACGGCT TTGGTTTGGC AGGTTTAGGC ATGTTAGCGG GGTTGTTGGT GTTTATTCGG GGTAAGAAAC ACCTGCAAGG TTTCGCCGAA CCCAGAGATC CCGCAAGAAT TTTAAAGAAA ACCGCCGGCA TCACCACAGA GCAATGGATT TATTTAAGCG CCATCGGCAG CGTAGTGCTG GTCTGGGGCT TAATTCAAAC CCACTCCCTT GTGCTTTCTA TTAGCAGTTT ATTACCCGCT GTGAGTCCAG TTATTTGGTT CTTGCACTCA GTATCTCTGG TGCTCGCCCT CGGGATAGGC TGGTTTATGG TGAAACACTG CAACCCGATT GAACGTCAAC AGATGTCGGC CTTACTGCTG TTCATCGTCG CAGGTTTGGT CTTCTTCGGC TTATATGAGC AAACCTACGG TTCTTGGGTA GCATTTTCGG ACCGCGTGAT GGACCGCAAC ATGCTCGGCC TCCAATGGAG CGCGGGACAG TTAACCTTCC TCGGCGCCTT CTTTGTGATC AGTTTATCGC CCATCTTTGC TTGGCTATGG CCTGCCCTCG CCCGTAAACA TTGCGATCCG AGCAAACCGG TTAAAACCGC ACTCGGCATT TTATTCGCAG GTTTATCCTT TATGGTGCTA GTACTCGGGA TCCAAATGCC GCTAAGCAGT GGCTTAGTGA GTATTTGGTT TTTAGTCGCG GCTTATTTTG TATTGGAAAT CGGCGAGTTA TTGCTGTCGC CCATTGGCTT ATCTGCTGTA ACTCAGCTGT CGGTAAAACG CGTGGTCAGC CTGATGATGG GCGCTTGGTT CCTCGGTACT TCATACTCTG AAATCTTAGC CGCCGAATTA AACAAGCTCG CCGCGATTGA TACCCAAGGC GGCGTAATAA GTGACGTACC GAGTGCGATG GCGCTATATG AGCAACTGTT TATCTTCTCG GCGCAAATTG GCGTGGTAAT GGCGTTAGTC TTCTTTGCCC TTGCGCCATT AATGAAGAAA ATGATGCACG AAAAAACAGC AACAAGTTAA
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Protein sequence | MSTEQHPPHA MQGLQGSPPP EMLFGHPKGL FVCFFTEMWE RFSFYGMKAL LFLYLIKYHL FTDEFGYNVI GAYGALVYAM PVVGGLLADR YIGMRKAVIF GGILLVLGHL GMAFEGHQAV IVAGEVQRDE QALQVFYLSL ALIIVGVGFL KPNISTIVGQ LYPESSPKRD SGFTIFYAGI NLGATLAPLI CAYLGETYGW KYGFGLAGLG MLAGLLVFIR GKKHLQGFAE PRDPARILKK TAGITTEQWI YLSAIGSVVL VWGLIQTHSL VLSISSLLPA VSPVIWFLHS VSLVLALGIG WFMVKHCNPI ERQQMSALLL FIVAGLVFFG LYEQTYGSWV AFSDRVMDRN MLGLQWSAGQ LTFLGAFFVI SLSPIFAWLW PALARKHCDP SKPVKTALGI LFAGLSFMVL VLGIQMPLSS GLVSIWFLVA AYFVLEIGEL LLSPIGLSAV TQLSVKRVVS LMMGAWFLGT SYSEILAAEL NKLAAIDTQG GVISDVPSAM ALYEQLFIFS AQIGVVMALV FFALAPLMKK MMHEKTATS
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