Gene Shew185_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1514 
Symbol 
ID5372896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1830728 
End bp1831684 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content55% 
IMG OID640829711 
ProductABC transporter related 
Protein accessionYP_001365725 
Protein GI153000044 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCACG CCGATTTTGC TATCGAGACC CAAGGCATGA CCCGCGCCTT TGGCGGCGTC 
AATGCGGTGG AAAACCTCGA CCTCGCCATT CCCAAGGGAA CCATTTATGG ATTTCTTGGC
CCCAATGGCT GCGGAAAATC CACATCAATC CGCATGTTGA CTGGGCTGCT GAGCCCAACG
TCGGGGGAAA TCCGCGTCTT GGGTGAAACC TTACCCGGCG CCGAGGAAAA ACTGCGTCGC
CGCATCGGCT ATATGACGCA AAAATTCTCC CTGTACGACA ATCTTTCTGT GCGGGAAAAC
TTAGAGTTTG TCGCGCAAAT TTATGGTTTG AACCGCCGAG CCTCAAAGCT GCGGATAGCC
GAGTTAGTCA CGCTGTACGA TTTAGTCGGC CGAGAAAAAC AAATGGCGGG CTCCATGAGT
GGCGGCCAGA AACAGCGTTT GGCCTTAGCG GCAGCGACCT TACATCACCC CGAATTATTG
TTCCTCGATG AGCCGACATC GGCGGTCGAT CCCGAGAATC GGCGCGAGTT TTGGGAGCGC
TTATTCGATC TCTGCGCCCA AGGCACCACG ATTCTTGTGT CGACTCACTA TATGGATGAA
GCCGAGCGTT GCCACGGTCT GGCGATTTTA GAGCGGGGGA TAAAACGCGC CGACGGTTCA
CCCCAGCAAC TGATGGCGGC GATGGGCGCT CGGGTGGTTG AAATCTCAGG GGATGATTTA
CGTAATTTAA AGCAATCATT GATCAGCGAG TCCGCGGTAT TGTCGGCGGC GCAGATTGGC
AGTCGTTTAC GGGTGTTAGT GCGCAGCGAT ATTGAAGATC CGCTCGCTTG GCTTAAACCT
CGGGTTGCCA GCCGGACGAT GGAAGAAGTG CGCGCTAGCC TAGAAGATGT GTTTGTCACT
TGCACCGGCG AGCGTTTGGC TGGGGTGTCC AAGGGAGCAA CTGACCATGT GGCGTAG
 
Protein sequence
MSHADFAIET QGMTRAFGGV NAVENLDLAI PKGTIYGFLG PNGCGKSTSI RMLTGLLSPT 
SGEIRVLGET LPGAEEKLRR RIGYMTQKFS LYDNLSVREN LEFVAQIYGL NRRASKLRIA
ELVTLYDLVG REKQMAGSMS GGQKQRLALA AATLHHPELL FLDEPTSAVD PENRREFWER
LFDLCAQGTT ILVSTHYMDE AERCHGLAIL ERGIKRADGS PQQLMAAMGA RVVEISGDDL
RNLKQSLISE SAVLSAAQIG SRLRVLVRSD IEDPLAWLKP RVASRTMEEV RASLEDVFVT
CTGERLAGVS KGATDHVA