Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1488 |
Symbol | |
ID | 5371518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1797097 |
End bp | 1798038 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829687 |
Product | homoserine O-succinyltransferase |
Protein accession | YP_001365701 |
Protein GI | 153000020 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1897] Homoserine trans-succinylase |
TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.256727 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTTA GAATTCCAGA TCATCTGCCC GCAGCAGAAG TGTTAGAGTC AGAAAATATT TTCGTTATGT CCGAGACGCG GGCGGCTAAT CAAGATATCA GGCCGATGAA GGTGCTGATT TTGAACTTGA TGCCGAACAA AATCGAGACA GAAACCCAGT TACTGCGCTT ACTGGGCAAC ACGCCTTTAC AAGTCGATGT GGATTTATTG CGCATTCACG ACAAAGAATC CAAGCATACT TCCATCGATC ACATGAATAC TTTCTACCGT GACTTTGAAG CCGTGCGCCA TAAAAATTAC GACGGCCTTA TCATCACAGG TGCGCCGCTT GGGCAAATCG ATTTCGAAGA TGTAGTTTAT TGGGATCATA TCCGTGAAAT CATCGACTGG TCCCAAGAGC ATGTCACCTC AGTGTTGTTT TTATGCTGGG CAGCCCATGC GGGTTTATAT CATCTCTATG GTTTAAATCG AAAAATATTG CAACAGAAGC GTTCAGGCGT ATTCGTGCAT CGCCGTACCT CTCAGCATTT CCCGTTACTG CGCGGTTTTG ATGATGAATT TTTTGCACCC CATTCCCGTT TTGCCGAAAT GGATGTCGAA GAAATTAGAC AACATCCACA GCTGCAGCTA TTGGCCGAGT CCGATGAGGC AGGGGCTTAT TTGGTGTTAA GTCGGAATAA TCGTAACTTG TTTGTGATGG GTCATCCTGA ATATCAAAAG TCGACCTTAA ACGAGGAATA TCAGCGAGAC TTAAGCCAAG GTTTAGACCC GAATGTGCCG CAGAATTATT ATCGCAATGA TGATCCTAAA GCCGACGCCA TTGCCCGCTG GCACAGCCAC GGTAGCCTGC TGGTAAGTAA TTGGCTTAAT TATTACGTCT ATCAGTTAAC CCCTTACGAC TTAAGCGATA TGACGGCGAT GACACCGTGG GAGTCGCGTT AA
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Protein sequence | MPVRIPDHLP AAEVLESENI FVMSETRAAN QDIRPMKVLI LNLMPNKIET ETQLLRLLGN TPLQVDVDLL RIHDKESKHT SIDHMNTFYR DFEAVRHKNY DGLIITGAPL GQIDFEDVVY WDHIREIIDW SQEHVTSVLF LCWAAHAGLY HLYGLNRKIL QQKRSGVFVH RRTSQHFPLL RGFDDEFFAP HSRFAEMDVE EIRQHPQLQL LAESDEAGAY LVLSRNNRNL FVMGHPEYQK STLNEEYQRD LSQGLDPNVP QNYYRNDDPK ADAIARWHSH GSLLVSNWLN YYVYQLTPYD LSDMTAMTPW ESR
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