Gene Shew185_1481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1481 
Symbol 
ID5371328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1789678 
End bp1791216 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content49% 
IMG OID640829680 
Producttranscriptional regulator, TyrR 
Protein accessionYP_001365694 
Protein GI153000013 
COG category[K] Transcription
[E] Amino acid transport and metabolism 
COG ID[COG3283] Transcriptional regulator of aromatic amino acids metabolism 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000204273 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCTTGG AAGTCAGCTG TCAGGATCGT GTTGGTTTAG CCAAAGATAT CTTAGTCGTG 
TTAGAGCGTT ATGGTATTAA TTTAATTGCC ATTGATGCCA GTAACCAAGG ATTCCTGTAC
TTACAATTTG CCGAAATCAG TTTTGAAACC TTAAGTGCCT TGATGCCGCA GATCCGCAAA
GTGGAAAGTG TCCATGATGT GCGTACGGTT TCGTTTATGC CCTCAGAGCA AGAACATTAC
GCCCTTAAAA CCTTGCTCAA AACCTTACCC GATTCCGTTT TCTCCATCGA TGCTAAAGCG
CGTATCCGTA TCGTTAACGA GTCCGCCTTG CTCAATATCG GTATGGGTGA GCACGAAGTG
CTCGAAGAGT CGCTCAATCA TTGGGTGCAA GGTTTTAACT TCAGCCGCTG GTTGAGCGAA
AGCCAAGTCT TACCGCAAGC GGCGAGGGTA CAAATTGGTC CAAACGAATA TTTAGCCGAA
ATGCTGCCGA TTTACCTGCC CGATGAGGAT GAGAAAACTA TCTTAGTTGG CGCTGTGGTG
TCGCTAAAAT CCCCCGCGCG GGTTGGAAAA CAATTTAACG CGCTGCAGAA TCAAACTACT
GGCTTTGAAA ATGTATTAGC CAGCAGTGAC AAAATGAAGG AAGTGCTTAA GCAAGCGCGG
CGGATGGCCC AGCTCGATGC GCCTTTATTG ATCACAGGTG AAACGGGTAC TGGTAAAGAA
TTAATGGCCA GAGCCAGCCA CGATGCCAGC ATGCGCCGCG AGAAACCCTT TATCGCCATC
AACTGCGCCG CTCTGCCCGA CAGCGCCGCC GAAGAAGAAC TATTCGGTTA TGTCAGTCAG
GGCAAAGTCG TTAAACGGGG TTTCTTTGAA GAAGCTAAAG GCGGCACAGT ATTTCTCGAT
GAAGTGGCTG AGATGTCCAA GGCCGCACAA GTTAAGCTGC TTCGTCTATT GCAAGATGGC
ACCTTTAGAC GTATCGGCGG CGATGAAGAA GTCCGTGCCG ATGTGCGGAT CATTTGCTCA
ACCCAGAAAA ATTTAGCCGA ACTGTGCCAA ACCGGTGAGT TTAGGGAAGA TTTGTACTAT
CGCATCCATG TGCTCAGTTA TCACATACCG TCACTGCGCG AGCGTAAAGT CGATATCATT
CCACTGACAG AAATGTTCCT CGAACATTAC AGCCAACAGT TATCTAGCCC AGTGCGACGG
ATTTCGGCCC AGTGCCGCGA TCATTTGCTC ACCTACGCTT GGCCAGGTAA CGTACGCCAA
TTAAAGAACG CAGTATTTAG AGCTGTGTCT ATGTGGGATG GTTCGGCCGA GTTGACGGTA
GAACAATTAA AACTGCCGTC CTACGCCGAA GGTTTTGGTT ACTTTGACAA TGAGTTTGAA
GGCAATCTCG ACGATGCGAT GAAGCAGTTT GAAGCGAGTC TGTTGCGTCG ATTATATCCA
GCCTATCCGA GTACTCGTCA GTTAGCGAAA AAGCTCGGGG TGTCGCACAC CGCTATTGCC
AATAAGCTGC GTGAGTACAA GATAGCCAAG CGTCGTTAA
 
Protein sequence
MRLEVSCQDR VGLAKDILVV LERYGINLIA IDASNQGFLY LQFAEISFET LSALMPQIRK 
VESVHDVRTV SFMPSEQEHY ALKTLLKTLP DSVFSIDAKA RIRIVNESAL LNIGMGEHEV
LEESLNHWVQ GFNFSRWLSE SQVLPQAARV QIGPNEYLAE MLPIYLPDED EKTILVGAVV
SLKSPARVGK QFNALQNQTT GFENVLASSD KMKEVLKQAR RMAQLDAPLL ITGETGTGKE
LMARASHDAS MRREKPFIAI NCAALPDSAA EEELFGYVSQ GKVVKRGFFE EAKGGTVFLD
EVAEMSKAAQ VKLLRLLQDG TFRRIGGDEE VRADVRIICS TQKNLAELCQ TGEFREDLYY
RIHVLSYHIP SLRERKVDII PLTEMFLEHY SQQLSSPVRR ISAQCRDHLL TYAWPGNVRQ
LKNAVFRAVS MWDGSAELTV EQLKLPSYAE GFGYFDNEFE GNLDDAMKQF EASLLRRLYP
AYPSTRQLAK KLGVSHTAIA NKLREYKIAK RR