| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1469 |
|---|
| Symbol | |
|---|
| ID | 5370317 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1777058 |
|---|
| End bp | 1777864 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640829668 |
|---|
| Product | 3'(2'),5'-bisphosphate nucleotidase |
|---|
| Protein accession | YP_001365682 |
|---|
| Protein GI | 153000001 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1218] 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase |
|---|
| TIGRFAM ID | [TIGR01331] 3'(2'),5'-bisphosphate nucleotidase, bacterial |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAGACA AGACGACAAT AGCACAGACA TTGACCAAAC AAGATCTACT GCAAGTGGTC
GCGATTGCCA AAACGGCGGG CGATGCCATT ATGACGGTTT ATGGTCAAGA TGACTTTTCG
GTGAGCCATA AGGGTGACGA TAGTCCCGTT ACTGCCGCCG ATTTAGCCGC GCACCACGTG
ATAGTGGCGG CATTGGCGCA GCAGTTTGTC GGTATTCCTA TTATGTCTGA GGAAGCGGCG
GATATTGCGT GGGATGAGCG TCGTCAATGG CAAACCTATT GGTTAATTGA CCCTTTAGAT
GGCACTAAGG AATTTATTAA GCGCAATGGC GAGTTCACCG TCAATATTGC GCTTATCCAT
CAAGGGGTTG CAATCGCAGG TGTGGTATAT GCGCCTGTGC TCGATACCTA TTATTACGGC
GCTAAGCATT TAGGTGCATG GCGTCAACAA GCGGGTCAAG AAAGTCCCTT ATTGGGCGCT
AAAGCGCCAC GCGCGATGCC GATGATTGTT GGCAGTCGCT CGCACTTGAG CCCTGGTTTA
GCGCAATATT TACAACAGTT TGGCGAGCAT GACATCTTAA GCGTGGGTAG CTCGCTTAAG
TTTTGTATGT TGGCAGAAGG CAGTGCCGAT CTGTACCCCA GACTTGGCCC AACTAGCGAA
TGGGATACTG CTGCGGCGCA AGCTGTGCTC GAAAGTGCTG GCGGCACAGT TGTCTGTTAC
GACTCAGGTG AACCATTAAC TTATAATCAA AAACCTGACA TTTTAAACCC TTACTTTATT
GCCACAGCCC CAGGCTGGGT GAAATAA
|
|---|
| Protein sequence | MIDKTTIAQT LTKQDLLQVV AIAKTAGDAI MTVYGQDDFS VSHKGDDSPV TAADLAAHHV
IVAALAQQFV GIPIMSEEAA DIAWDERRQW QTYWLIDPLD GTKEFIKRNG EFTVNIALIH
QGVAIAGVVY APVLDTYYYG AKHLGAWRQQ AGQESPLLGA KAPRAMPMIV GSRSHLSPGL
AQYLQQFGEH DILSVGSSLK FCMLAEGSAD LYPRLGPTSE WDTAAAQAVL ESAGGTVVCY
DSGEPLTYNQ KPDILNPYFI ATAPGWVK
|
|---|
| |