Gene Shew185_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1461 
Symbol 
ID5370192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1763750 
End bp1765225 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content49% 
IMG OID640829660 
ProducttRNA(Ile)-lysidine synthetase 
Protein accessionYP_001365674 
Protein GI152999993 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control 
TIGRFAM ID[TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain
[TIGR02433] tRNA(Ile)-lysidine synthetase, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTTA AGTTTGATGA GCCATTGGCA GCTTGCGATC TCAGCGCGCA TATTAGTGCT 
TTTTTGACGG CGCAGTCGTT AGCGCCTGAC TGCAAGTTAG TGCTGGCTTA CAGTGGCGGT
GTTGATTCCG AAGTTTTGGC CTTTGGCTTA AGTCAGTTTG CGCGGCAACA TCCCGAGTTT
CATTATCAAC TGGTGTATGT GCACCATGGC CTCAGTGATA ACGCTGATTC TTGGGCGCAG
CATTGTCTTG AGCGCGGTCA ACATTATGGT TTGCCCGTGA CGGTTGAGCG AGTGACAGTT
AATCGCGGAC CCAGATTAAG CCTTGAAGCC GAAGCACGAA AAGTCCGTTA TCAAGCGATT
GAACGGCATT TAAGTGCAAA TGATGTGTTG CTGACGGCCC ATCATGAAGA TGATCAGCTG
GAAACTATTC TGCTGGCGCT GAAACGTGGT CAGGGCCCGA AGGGGCTGGC GGCCATGGGG
CAAGTACAAG CATTAGCACA AGGCAGACAA CTGCGGCCGT TATTGGATAT TAGCCGTGAG
CAAATAGAAG CCTACGCAAA ACAACAGGGC TTAGTGCATA TCGAAGATGA AAGTAATCAA
GACGATAAGT ACGATCGTAA TTTTTTACGT TTAGAAATCA TTCCCCGTTT AAAAGCGCGC
TGGCCGAGTA TTGCGACAAC TGCGAGTCGC AGCGCGGCAT TGTGCGCCGA GCAACAGGCA
ACGTTGGATT TACAGGTGAG TGAACGTTTA CCTTTATGGT TAACCCAAGC GCCTTACCAT
ACTCAATGTG TATTTAAGCT CGAGGGTTTT GCCGAGCAGT CAGCCGACTG GCAAGCGTTA
CTCTTGCGGG GATTTATCGA ATCACAAGGT TTTGCCTTGC CCTCAAAGGT GCAGCTTAAT
CAGATCATCA CTCAGCTTTT AACCGCGAAA GATGATGCCA AAGTGCATAT TCGAGTGGGT
GAGTGTGAAA TCCGCCGCTT TGCTAATCAA GTGTATTTAT TTAAGTATCA AACCCGCATG
CGTCATGTTA AGCCTGCGAG TTGGACACTT CCTTCGCAGC TCCTCAATCC TTTAGTGCAG
GGCGATGTTA CTCAAGTGGA CGTGACTCAA TCAGACGTTA CTCAATTGGA TGTGACTCAA
TTAGACGTGA AACCTGCGGG TGTTACTTGT GGTGAGACGA TACGTCTCAG TGCCTCTAGA
CAAGGGCCTA GAGCTCGCTT TCCTCGGCCA GATGAAGTGT TGAGTGTGCG TTATCAACTT
GCGGGGCAAT ATCGCTGTCA TCCCCATTCC CGTGGCAAGG GCCGAGAATT AAAGAAACTG
TGGCAAGAGT TTGCCGTTCC GCCTTGGGTA CGTGAAAAGA TCGGTTTCGT GTTCTATAAC
GAGCAACTGG TGATGGCGAT TGGGCTGTGG GTTGAAAAAA GCTTTATTCT TGAGTTGAAT
GGACTCGGTT TGCAGGTCTC TCAAACTTCT GTTTAA
 
Protein sequence
MSVKFDEPLA ACDLSAHISA FLTAQSLAPD CKLVLAYSGG VDSEVLAFGL SQFARQHPEF 
HYQLVYVHHG LSDNADSWAQ HCLERGQHYG LPVTVERVTV NRGPRLSLEA EARKVRYQAI
ERHLSANDVL LTAHHEDDQL ETILLALKRG QGPKGLAAMG QVQALAQGRQ LRPLLDISRE
QIEAYAKQQG LVHIEDESNQ DDKYDRNFLR LEIIPRLKAR WPSIATTASR SAALCAEQQA
TLDLQVSERL PLWLTQAPYH TQCVFKLEGF AEQSADWQAL LLRGFIESQG FALPSKVQLN
QIITQLLTAK DDAKVHIRVG ECEIRRFANQ VYLFKYQTRM RHVKPASWTL PSQLLNPLVQ
GDVTQVDVTQ SDVTQLDVTQ LDVKPAGVTC GETIRLSASR QGPRARFPRP DEVLSVRYQL
AGQYRCHPHS RGKGRELKKL WQEFAVPPWV REKIGFVFYN EQLVMAIGLW VEKSFILELN
GLGLQVSQTS V