| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1453 |
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| Symbol | |
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| ID | 5369496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1752751 |
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| End bp | 1755231 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640829652 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_001365666 |
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| Protein GI | 152999985 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000244779 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGATTGA ATAAACTTTT TGCCTCGATG TTATTCGTCG GTGCGTCGTT TTCAGGGACT
GTGTTGGCTG ATACTTTCCA ACCGTTTGAA GTGACCGACA TCCAAGTTGA AGGTTTGCAG
CGAGTTGCAC TCGGTGCTGC CCTGTTAAGC TTACCAGTAA AAGTAGGTGA CACTGTTGAC
CAGTTAAGAA TTCAACAAGC CATTAAAAGC TTGTATGCAT CGACTAACTT TGAAAATGTC
TCCGTGAGCC GAGATGGCGG CGTATTAGTG GTGAAAGTCA CTGAACGTCC TACCATCAGT
GCCGTGACAT TCGATGGCAA CAAAGACATT AAAGACGAAC AGTTACAGGA AAGTCTGGAC
GGTTCTGGCG TTAAAGTCGG TGAGTCGCTC GATCGCACTA TGTTGACCGG TATTGAAAAG
GGTCTGCAGG ATTTCTACTA CGGCGTGGGT AAATACGGCG CTAAAGTGGA AGCTCAAGTG
ATCAACTTAC CCCGTAACCG GGTTGAGCTG AAATTTAAGT TCACCGAAGG TTTAGCGGCC
GAAATCCGCC AAATTAACGT GGTCGGTAAT CATGAGTTCA CCGATGCTGA GTTGATTGGC
ATGCTGGAAC TTAAAGATTA TGTGGCTTGG TGGGATCTGT TCGGCGAACG CCGTTATCAG
AAACAAAAGC TGCAGGCTGA TCTCGAGACC ATCAAAACCT ATTATCACAA TAAAGGTTAT
ATCCGCTTTG AAGTCACCTC GACTCAAGTG GCGATGACGC CTGACCGTAA AGGTTTATAT
ATCACCATCA ACGTAGATGA AGGTGAGAAA TATAAAGTTA AAGAAGTAAA CCTGACGGGT
GATTTGATGG GCCGTGAAGA GTTGATGAAA TCAATTCTGC CGATCAAAGC GGGTGATATG
TACAACGGCG GTGATGTGAC TTTCACCGAA GAAATGTACA GCAAATATTT AGGCCGCTTC
GGTTATGCCT ATCCAGAAGT CAAAACGTAT CCTGAAATTG ATGATAAGAC TAAAGAAGTC
ACCTTAAACA TCAATGTTAA ACCGGGTAAA CGTGTTTACG TGCGTGCGAT TAACTTCACT
GGTAACACAG TGACCAAAGA TGAAGTGATG CGCCGTGAAC TGCGTCAGAT GGAAGGGGCT
TGGTTAAACT CAGCGCAAGT TGAGCAATCT AAAGCGCGTC TTAACCGTTT GGGCTTCTTC
GAAACCGTTG ACACTGAAAC CATTCAAGTG CCAGGCACTG ATGATTTAGT CGATGTTGCG
GTGAAAGTAA AAGAGCAGCC GTCGGGCTCA TTCAACGCGG GTGTCGGCTA TGGTACTGAA
TCAGGCCTGA GCTTGCAGTT TGGTGTGCAG CAAAATAACT TCTTAGGCAC AGGTAACCAA
GCAGGTATCA GCTTGAGCAC CAACAAGTAC TCTAAGAACG TTAACTTATC CTATACCGAT
CCGTATTGGA CGAAAGATGG CGTGAGTTTA GGGGGTAGCG TTTATTGGAG CGAGTTTGAC
GCCAATGAAG CTAACTTAGA GCGTTATAAA AACAGTTCTT ACGGTGTAGC GCTGAACTCG
GGTTTCCCAA TTAACGAATA CAATCGCATC AATGGTGGCA TAGGCTATCG TCATAACACG
ATTTCTGAAA TTTCTGCCTA TGAACAAGCA CTGCGTTTCT ATAACATCTA CCGTGATGAC
GATCCAAATG CGGACTTAAG TTTCGATAAC TTTGAACTGA GTCTGGGCTG GTATCGTAGC
ACCTTGAACC GTGGCACTTT CCCAACAGAC GGCTCGTCTC AGCGTTTGAA CGGTAAAATG
ACTTCGCCAG GGTCTGATTT ACAGTACTTT AAGACAGACT TTGACACTAA CTTCTATTTC
CCTATTAACC GTAGTCAGAG CTTTGTGCTC TTGGCCCGTG GTCGATTAGG TTATGGTAAC
GGTTATGGTC AATTTAATGA TAACGACCAA ATTCTGCCTT TCTGGGAAAA CTATTACTCA
GGTGGTAGCA GTTCACTGCG TGGCTTTAAG TCTAACTCTG TGGGGCCTCG TTCATTCTAT
CTCTACCGAG GTAGTGAACC ATGTGCACCG GATCCATCGG GCGATGGTTG TAGTTTGCCA
GGCGATCCTA ACAGTATCCA AGTGAGTTCT GGCCGTTCGA TCGGTGGTAA CGCCCTTGCG
ACAGCGAGCA TGGAGTTGAT TGTACCGACG CCATTCTTGG ATGAGGCTTA CACTAACTCA
GTGCGTACGA GTTTCTTCGT TGATGCGGGT AACGTTTGGG ATACTGAGTT TGATTACAAT
GCATATCAAA CACTTCCAGC GGACGAGTTT GCTAAGTTAC AGGACTACAG TGATCCAGCA
CGTTTACGCG CTTCTTGGGG CTTAAGTGTG CAGTGGTTAT CACCTATGGG TCCTATGGTG
TTTAGCTTAG CGTGGCCGAT TAAAGAATAC GAAGGCGACC AAACAGAGAT CTTCTCTTTC
AATATTGGCA AAACTTTTTA A
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| Protein sequence | MRLNKLFASM LFVGASFSGT VLADTFQPFE VTDIQVEGLQ RVALGAALLS LPVKVGDTVD
QLRIQQAIKS LYASTNFENV SVSRDGGVLV VKVTERPTIS AVTFDGNKDI KDEQLQESLD
GSGVKVGESL DRTMLTGIEK GLQDFYYGVG KYGAKVEAQV INLPRNRVEL KFKFTEGLAA
EIRQINVVGN HEFTDAELIG MLELKDYVAW WDLFGERRYQ KQKLQADLET IKTYYHNKGY
IRFEVTSTQV AMTPDRKGLY ITINVDEGEK YKVKEVNLTG DLMGREELMK SILPIKAGDM
YNGGDVTFTE EMYSKYLGRF GYAYPEVKTY PEIDDKTKEV TLNINVKPGK RVYVRAINFT
GNTVTKDEVM RRELRQMEGA WLNSAQVEQS KARLNRLGFF ETVDTETIQV PGTDDLVDVA
VKVKEQPSGS FNAGVGYGTE SGLSLQFGVQ QNNFLGTGNQ AGISLSTNKY SKNVNLSYTD
PYWTKDGVSL GGSVYWSEFD ANEANLERYK NSSYGVALNS GFPINEYNRI NGGIGYRHNT
ISEISAYEQA LRFYNIYRDD DPNADLSFDN FELSLGWYRS TLNRGTFPTD GSSQRLNGKM
TSPGSDLQYF KTDFDTNFYF PINRSQSFVL LARGRLGYGN GYGQFNDNDQ ILPFWENYYS
GGSSSLRGFK SNSVGPRSFY LYRGSEPCAP DPSGDGCSLP GDPNSIQVSS GRSIGGNALA
TASMELIVPT PFLDEAYTNS VRTSFFVDAG NVWDTEFDYN AYQTLPADEF AKLQDYSDPA
RLRASWGLSV QWLSPMGPMV FSLAWPIKEY EGDQTEIFSF NIGKTF
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