Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1445 |
Symbol | rpsB |
ID | 5373229 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1745241 |
End bp | 1745969 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640829644 |
Product | 30S ribosomal protein S2 |
Protein accession | YP_001365658 |
Protein GI | 152999977 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000000563194 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACAG TTTCAATGCG CGATATGCTT CAGGCCGGTG TCCACTTCGG TCACCAAACC CGTTACTGGA ACCCAAAAAT GAAGCCATTC ATTTTCGGTG CTCGCAACGG TGTTCACATC ATCAACCTTG AGCATACAGT GCCAATGTTC AATGAAGCGC TGGCTTTCAT CAGCAACGTA GCTTCAAAGA AAGGTAAGGT ATTATTCGTT GGTACTAAAC GTGCTGCTGG CGAAGCGATC AAAGAATCAG CTCTGTCTTG TGATCAGTTT TATGTTGATC ACCGCTGGTT AGGCGGTATG TTGACTAACT GGAAAACTGT TCGTCAGTCA ATCAAACGTC TGAAAGAACT AGAAAGCCAA TCAGTTGACG GTACTTTCGA CAAGCTGACC AAGAAAGAAG CGCTGATGCG TACTCGTGAG CTTGAAAAGC TGGAAAAATC TTTAGGTGGT ATTAAAAACA TGGGCGGCCT GCCAGACGTA TTATTCGTCA TCGGTGCTGA CCATGAGCAT ATCGCTATTA AAGAAGCTAA CAACCTGGGT ATCCCTGTTG TTGCAGTTGT TGATACTAAC TCTGCGCCAG ATGGTGTTAA CTACATCGTT CCTGGTAACG ACGACGCTAT GCGTGCTATC CGCCTGTACA CTTCTTCTGT TGCTGCTGCT GCAAAAGCTG GCCGTGGTCA AGATTTGGCT GTTCAAGCTG AGCAAGACGG TTTCGTAGAA GCCGAATAA
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Protein sequence | MTTVSMRDML QAGVHFGHQT RYWNPKMKPF IFGARNGVHI INLEHTVPMF NEALAFISNV ASKKGKVLFV GTKRAAGEAI KESALSCDQF YVDHRWLGGM LTNWKTVRQS IKRLKELESQ SVDGTFDKLT KKEALMRTRE LEKLEKSLGG IKNMGGLPDV LFVIGADHEH IAIKEANNLG IPVVAVVDTN SAPDGVNYIV PGNDDAMRAI RLYTSSVAAA AKAGRGQDLA VQAEQDGFVE AE
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