Gene Shew185_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew185_1387 
Symbol 
ID5371207 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS185 
KingdomBacteria 
Replicon accessionNC_009665 
Strand
Start bp1671952 
End bp1672578 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content47% 
IMG OID640829586 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_001365600 
Protein GI152999919 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATCAG TCGTGTTGGG TGAAAAGCGT ATCGTACCGA CAAAAATTGT CTGCATTGGA 
CGTAATTATG TCGATCATAT CCATGAGTTG GGCAATGACA TACCCGACGA CATGGTGGTG
TTTTTAAAGC CCAATTCGGC CATGTCGACA GTATTGCTTG CTGAGCATCA AGGTGAAGCC
TTGCACTATG AAACCGAGCT GTGTTTTATG TTTCAAGATG GCCGCTTTAG CAGCGTTGCT
GTTGGGTTAG ATCTCACTAA GCGTGATTTA CAAAGCAAGT TAAAAGCCAA GGGATTGCCT
TGGGAGCGAG CAAAGGCCTT CGATGGGGCC GCATTATTCA GCCCCTTTGT GGCGATTGAT
GATGCCGAGG CGCCGCTGCA TTTTACCTTG AGTATCAACG ATAACTTGGT GCAAGAGGGG
CATATCGATT TAATGATCTA CAAACCTCAG ACCATTTTGT CCGAGTTGCA AGCCTTTATC
AGTCTCGATG ACGGCGATAT TGTGATGACA GGCACCCCCA AGGGCGTGGG AAGTATTCCC
GCTAAAAGTG TATTCAACGT CACGCTGAGC CGGGGTTTGC AAGCGAGTGC TGAACCTTTG
CTTGAATGGC AATGGTTAAG TGTTTAG
 
Protein sequence
MKSVVLGEKR IVPTKIVCIG RNYVDHIHEL GNDIPDDMVV FLKPNSAMST VLLAEHQGEA 
LHYETELCFM FQDGRFSSVA VGLDLTKRDL QSKLKAKGLP WERAKAFDGA ALFSPFVAID
DAEAPLHFTL SINDNLVQEG HIDLMIYKPQ TILSELQAFI SLDDGDIVMT GTPKGVGSIP
AKSVFNVTLS RGLQASAEPL LEWQWLSV