| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1348 |
|---|
| Symbol | |
|---|
| ID | 5372943 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS185 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009665 |
|---|
| Strand | + |
|---|
| Start bp | 1620255 |
|---|
| End bp | 1621709 |
|---|
| Gene Length | 1455 bp |
|---|
| Protein Length | 484 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 640829547 |
|---|
| Product | thiamine biosynthesis protein ThiI |
|---|
| Protein accession | YP_001365561 |
|---|
| Protein GI | 152999880 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0301] Thiamine biosynthesis ATP pyrophosphatase |
|---|
| TIGRFAM ID | [TIGR00342] thiazole biosynthesis/tRNA modification protein ThiI |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTA TTGTAAAGCT GTACCCAGAA ATCATGATGA AGAGCAAACC CGTAAGGATG
CGCTTCACCA AAATGCTCGA AACCAACATA CGTAATGTAC TCAAAAAAGT CGACGAAGAC
GCTAAAGTTC AACGTCAGTG GGACCGCATT ATGGTAATGG TGCCAAAGGA TAAGCCTGAA
TTGGCCCAAG CCTTCGGTGA GCGTCTGGCG TGTATTCCTG GCATTGCACA CGTAGTGCAA
GTGGATGAGT ACAGCTTTGA ATCTGTGGAC GATATTTATC AGCAAGTCTT GCCTGTTTAC
CGTGACCAAC TCGCGGGTAA AACCTTCTGC GTGCGAGTGA AGCGCACTGG CGATCACGAT
TTTAATTCTA TCGAAGTGGA GCGTTACGTC GGCGGCGGCT TAAATCAGTT TACCGATGCT
TTAGGTGTGC GTTTAAAGAA TCCAGATATT ACCGTTAACC TTGAAATTGA ACGCGATAAT
CTTTACATGG TCACTAAGCG TATTGAAGGC TTAGGTGGTT TCCCGATGGC GACGCAGGAA
GATGTGTTGT CTTTGATTTC AGGTGGTTTT GACTCTGGTG TGTCTAGCTA TCAATTTATC
AAAAAGGGCG CGCGTACCCA TTACTGCTTC TTCAATCTGG GCGGCGCGCA GCATGAAATT
GGCGTAAAAC AAGTGGCTTA CCATTTGTGG AAAACCTACG GCGAATCCCA CAAGGTTAAG
TTTATCTCTG TGCCTTTTGA GCCTGTGGTC GCTGAGATTT TAGAGCGTAT CGATAATGGC
CAAATGGGCG TTGTGCTCAA GCGTATGATG ATGCGCACCG CGGCGCGTAT TGCCGACCGT
ATGGGCATTC AAGCCTTAGT AACCGGTGAA AGTTTAGGCC AAGTATCGAG CCAAACGCTG
ACCAACTTAA ACGTGATCGA CCGCTGTACT GAGCTGTTGA TTTTACGTCC GCTGATCGCC
ATGGATAAGC AAGACATTAT CAACGAGAGC CGTAAAATCG GCACCGAAGA TTTTGCCAAG
TCGATGCCTG AATATTGCGG CGTGATTTCG CAAAAGCCAA CAGTTAAAGC GGTATTAGCT
AAAGTTGAAG CGGAAGAGAA GAAGTTCTCT GAAGATTTGA TCGATCAAAT CATCGCCCAG
TCTGTCACTA TTGATATCAG GGAGATCGCA GAACAAATGG ATACTCGGAT TACTGAGACT
GAAACGGTCG CCAGTATTGA TACCAACCAA GTGGTCATTG ATATTCGCGC CCCTGAAGAA
GAGGAAAGCA AGCCGTTGCA AATTGAAGGT ATTGAGATTA AACGTATCCC ATTCTTCAAG
TTAGCGACTC AATTTGCCGA TCTCGATAAG CAAAAAACCT ATTTGCTGTA TTGTGAGCGT
GGGGTGATGA GTAAATTGCA GGCATTGTAT TTAATCGAGC AAGGCTACAC TAACGTCAAA
GTGTATCGCC CATAA
|
|---|
| Protein sequence | MKFIVKLYPE IMMKSKPVRM RFTKMLETNI RNVLKKVDED AKVQRQWDRI MVMVPKDKPE
LAQAFGERLA CIPGIAHVVQ VDEYSFESVD DIYQQVLPVY RDQLAGKTFC VRVKRTGDHD
FNSIEVERYV GGGLNQFTDA LGVRLKNPDI TVNLEIERDN LYMVTKRIEG LGGFPMATQE
DVLSLISGGF DSGVSSYQFI KKGARTHYCF FNLGGAQHEI GVKQVAYHLW KTYGESHKVK
FISVPFEPVV AEILERIDNG QMGVVLKRMM MRTAARIADR MGIQALVTGE SLGQVSSQTL
TNLNVIDRCT ELLILRPLIA MDKQDIINES RKIGTEDFAK SMPEYCGVIS QKPTVKAVLA
KVEAEEKKFS EDLIDQIIAQ SVTIDIREIA EQMDTRITET ETVASIDTNQ VVIDIRAPEE
EESKPLQIEG IEIKRIPFFK LATQFADLDK QKTYLLYCER GVMSKLQALY LIEQGYTNVK
VYRP
|
|---|
| |