| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew185_1332 |
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| Symbol | |
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| ID | 5369868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS185 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009665 |
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| Strand | + |
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| Start bp | 1597360 |
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| End bp | 1598715 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640829531 |
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| Product | multi anti extrusion protein MatE |
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| Protein accession | YP_001365545 |
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| Protein GI | 152999864 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.478618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGCAA TAACATCTAA TCATGCTCCT GCGGATATGA GCCTGCTCGA GGAGCCGATT
GCGAAGCTTT TTTGGCGCTA TACCATACCC ACCATTGCCT CTATGTTGGT GACGGGCGTC
TATGTGACGA TTGATGGCAT CTTCGTTGGC CACTATTTGG GTGAAACTGG GCTGGCGGGG
ATGATGTTAG CCTATCCAGT CGGCGCTATT TTGTATGCGA TTGGCGCTAT GATAGGCATG
GGCAGCGCCG CATTAGTGTC GATCAACCTT GGTCAAGGCA ATGTGGCTAA GGCTCGTAAA
TTGCTCGGTA ATGCCTTTAG TTTGTGTTTA TTGGCGGGAG CCATTTTTGC CCTCATGGGT
GGGATATTCT CGCGGGATAT TTTGATCGCC CTCGGGGCGC AGGGGGACAT TCTCGAAAAC
GCCAACGAAT ATCTGTTCTG GTATTTTGCC CTGTGTCATT TCCCCATTAT TTCAATGACC
TTCACCACAT TGCTGCGTAA TGACGGTCGG CCATCTATGG TGACTTGGGT GTTGATCTTG
GGCGGTGTAT TAAACACTTT CTTAGATTGG CTATTTATTG TGGTCTTCCC CTTTGGTTTA
GCGGGCGCTG CGATTGCGAC TATGATGTCG CAGGCGGTGA CTGGGCTTTT GTGTTTGCAG
CATTTTTTCA GTCCTCGGAC TCAGTTGAGG ATCGACCTTG AGCAGATGAA GCTTAAGCTC
GACAATTGCT TGAACATAGC CCGCGTGGGT TTACCCAGCT TTTTGATGAA CCTTTATTTA
TCGATAGTGT TAACCCTACA CAACACAGCT TTTTTGTGGG TGGGCGGCCC CTTACACGTG
GCAGCCTATG GCGTAGTCAG TTACACAGAA GCATTCTTCT ATTTGATTTT CGAAGGTATT
GCCCTCGGCA CGCAGCCAAT TTATAGCTTT AATGCGGGCG CTGGGCGTTT CGATCGAGTT
AAGCAAGCAC GTAATATTGC CTTTGGCATG ACGCTGCTCA CCGCAGTGTT GGGCTTAGCG
CTGATTTATT CTCGCCCTGA ATGGCTAGTG TATTTGTTTG CTGGCGATAA TCAGAACCTA
ACGCCCGTGG CGATTGAAGG TATGCGCTGG TATTTCTGGG GCTTACCAAT GGAAGGTTTA
ATCTTAGTCG GTGCGAGTTT CTTCCAAGCG ATTAATTGCT CGAAACAAGC CTCTATGCTG
ACCGGCGCGA AACTTATCCT GATCGCTGCG ATTATCTACT GCTTCGCTTG GATGTTCGGT
GTGATTGGTG TGTGGGTATC GCTCGCAACC TGTAGCACTA TTCTGACGAT ATGGATGTTC
TACGCCATGA AGCGAGTCGA GGCGCGGCTG CAATAA
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| Protein sequence | MTAITSNHAP ADMSLLEEPI AKLFWRYTIP TIASMLVTGV YVTIDGIFVG HYLGETGLAG
MMLAYPVGAI LYAIGAMIGM GSAALVSINL GQGNVAKARK LLGNAFSLCL LAGAIFALMG
GIFSRDILIA LGAQGDILEN ANEYLFWYFA LCHFPIISMT FTTLLRNDGR PSMVTWVLIL
GGVLNTFLDW LFIVVFPFGL AGAAIATMMS QAVTGLLCLQ HFFSPRTQLR IDLEQMKLKL
DNCLNIARVG LPSFLMNLYL SIVLTLHNTA FLWVGGPLHV AAYGVVSYTE AFFYLIFEGI
ALGTQPIYSF NAGAGRFDRV KQARNIAFGM TLLTAVLGLA LIYSRPEWLV YLFAGDNQNL
TPVAIEGMRW YFWGLPMEGL ILVGASFFQA INCSKQASML TGAKLILIAA IIYCFAWMFG
VIGVWVSLAT CSTILTIWMF YAMKRVEARL Q
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