Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew185_1321 |
Symbol | |
ID | 5370403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS185 |
Kingdom | Bacteria |
Replicon accession | NC_009665 |
Strand | + |
Start bp | 1577226 |
End bp | 1579457 |
Gene Length | 2232 bp |
Protein Length | 743 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640829520 |
Product | glycogen branching enzyme |
Protein accession | YP_001365534 |
Protein GI | 152999853 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.975501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGACTC AAGCCAATGC CTATTTCTAC GATGGCGCCG ACGTCGCCCT ACTTAATGGT CAATACACTG ATGTTTTTTC GCTTTTGGGT ATGCACAGTG CCAACGAGGG TAAGGCATTA ATTGTTCGTT GTTTTTTACG CAATGCCCTC AGTGTGGATG TGATCAGCAT TAAAGATGGC CGCAAAGTAG CGAGTCTGGA CAAAGTTAAC GAGCAGGGAT TGTTCGCCGG TACGCTGGGG CGACGCGTCA AACCGTTTCT CTATTTGCTG CGGGTAGAAT ACCCCCTGTG TCAGCTAGAT ATAGTCGACC CTTATCAGTT TGATTCACTG CTCAATAGTG ACGATATTTA CCTGTTTGGT GAAGGCAGCG CCGAGCGCGC CTATGAGTTT TTAGGCGCCA ACTGGCGTCA GACCCAAGGC GTTGAAGGTG TGCATTTTTG TGTGTGGGCA CCCAATGCCA AACGGGTTTC TGTGGTGGGG GATTTCAACC ATTGGGACGA TACTCGCCAT GTAATGCGCC AACATCTTGC CAATGGTTTG TGGGAGCTAT TTCTACCCAA TGTGGTTGAA GGCGCCCACT ATAAGTTTGA TTTGGTTTAT CAAAATGGTG AGCGTCATAC CAAGTCCGAC CCCATGGCGA CTCAAATGGA ATGCGCACCC CATAACGCTT CTATCGTGCC CCCAAAAGCC CATCACAGTT GGAATGATAC CGCTTGGATG AGTAAGCGAG CGGCGACAGC TTGGCATAAA GCGCCCATGT CGGCCTACGA AGTGCACTTA GGTTCGTGGC GTCGTAAGGG AGAGCAAGGC GAGCAATATC TTGATTATCA AGACTTGATT GAACAGCTTA TTCCCTATGT GAAGGAGCAA GGTTTTACCC ACATTGAACT GATGCCGATC AGCGAGTTTC CCTTCGATGG TTCGTGGGGA TATCAGCCTG TGGGTCTCTA TGCACCGACC CACAGATTTG GCGATGCCAA TGGGTTAAAA GCCTTTGTGG ATGCCTGCCA TCAGGCGGGA ATTGGTATCA TCCTCGATTG GGTGTCGGCG CATTTTCCTA AGGATCCCCA CGGCTTAGTG CGTTTCGATG GCACTTGTTT GTATGAGCAT GAAGATCCTC GCAAGGGCAC ACATCCCGAT TGGGATACCT TGATTTATAA CTATGATCGC GGTGAAGTGC GCAGCTTTTT ATTGAGTAAT GCCTGTTATT GGCTGCGGGA GTTTCATTTC GATGGCCTGC GTCTCGATGC CGTGTCTTCT ATGTTGTACC TCGATTACAG CCGCGAGCCG GGCCAATGGC TGCCCAATGC CTATGGTGGT CGGGAGAATC TTGAGGCCAT TAGTTTCTTA CAAATTTTGA ATCAACGCCT GTACCAAGCT TTCCCCGGCG TTTGCATGAT CGCCGAAGAG TCCACCGCCT TTGCGGGGGT GACTAAGCCG ACGGATCAGC AAGGTCTCGG CTTTGGCTTT AAATGGAACA TGGGCTGGAT GAACGACAGC TTAAGCTACT TAGGCCGAGA TCCGCTTTAC CGCCAATTCC ACCATCATCA ATTGACCTTC AGTTTGATGT ACGCCTATAC CGAGCAATTT ATGTTGTCCG TGAGTCACGA TGAAGTGGTC CACGGCAAGG GCTCGTTGCT ACATAAAATT CCCGGTGACG ATTGGCAGAA ATTTGCGACC CTGCGTGCTT ATTACGGTTT TATGTGGGGG CATCCCGGTA AGAAATTACT CTTTATGGGC TGCGAGTTTG GTCAGCGAAA TGAGTGGAAC CATAACCAGA GTTTAGATTG GCACTTATTG GCTTATGAAC CGCACCAAGG TGTGCAACGT TGGCTTAAAG ATCTCAATCA CTTATATCAA GCCATGCCTG CTTTATCGGT TCAGGATTAC GAGGGGGCAG GATTCAGTTG GCTAGATTGT GAAAATAGCC GCGATAGCAT CTTTACCTTT GTGCGTTACG GCTTAGCGGG TGATGCGCCG TTAGTGTTTG TCATCAATAT GACGCCCCAA TTGCACACTG GATTCCGTAT TGGTTTGCCT TTGGCGGGGG ATTACCGCGA ATACCTGAAT AGCGATAGCC AGATTTATGG TGGCAGTAAC CAAGGTAATG CGGGCACTGT CGTTGCTGAG TCGCTGCCGT GGCAGGGCAT GGCGCAGAGC GCGCTGATCA CTGTGCCGCC CTTGGGTTGT CTAGTGATTG GGCCTGCAAC TGGATTGGCT GAGGCGAACT AG
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Protein sequence | MMTQANAYFY DGADVALLNG QYTDVFSLLG MHSANEGKAL IVRCFLRNAL SVDVISIKDG RKVASLDKVN EQGLFAGTLG RRVKPFLYLL RVEYPLCQLD IVDPYQFDSL LNSDDIYLFG EGSAERAYEF LGANWRQTQG VEGVHFCVWA PNAKRVSVVG DFNHWDDTRH VMRQHLANGL WELFLPNVVE GAHYKFDLVY QNGERHTKSD PMATQMECAP HNASIVPPKA HHSWNDTAWM SKRAATAWHK APMSAYEVHL GSWRRKGEQG EQYLDYQDLI EQLIPYVKEQ GFTHIELMPI SEFPFDGSWG YQPVGLYAPT HRFGDANGLK AFVDACHQAG IGIILDWVSA HFPKDPHGLV RFDGTCLYEH EDPRKGTHPD WDTLIYNYDR GEVRSFLLSN ACYWLREFHF DGLRLDAVSS MLYLDYSREP GQWLPNAYGG RENLEAISFL QILNQRLYQA FPGVCMIAEE STAFAGVTKP TDQQGLGFGF KWNMGWMNDS LSYLGRDPLY RQFHHHQLTF SLMYAYTEQF MLSVSHDEVV HGKGSLLHKI PGDDWQKFAT LRAYYGFMWG HPGKKLLFMG CEFGQRNEWN HNQSLDWHLL AYEPHQGVQR WLKDLNHLYQ AMPALSVQDY EGAGFSWLDC ENSRDSIFTF VRYGLAGDAP LVFVINMTPQ LHTGFRIGLP LAGDYREYLN SDSQIYGGSN QGNAGTVVAE SLPWQGMAQS ALITVPPLGC LVIGPATGLA EAN
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